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  5. EDJ90082

EDJ90082 (CGSHi22421_06548)


Aliases : CGSHi22421_06548

Description : putative ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90082
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC73177 thiQ, b0066 thiamine/thiamine pyrophosphate ABC transporter ATPase... 0.05 OrthoFinder
AAC73469 tauB, b0366 taurine ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAL00804 spr2002, ABC-NBD ABC transporter ATP-binding protein-anion transport... 0.05 OrthoFinder
AAL19070 STM0106, yabJ putative ABC-transport protein [Ensembl]. ABC... 0.05 OrthoFinder
AGT25975 N559_4365 thiamine transporter ATP-binding subunit [Ensembl]. 0.03 OrthoFinder
AHY40384 CJ8421_05885 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
CCL18234 BN171_2170021 ABC-type transport system, ATP-binding protein... 0.06 OrthoFinder
CRO44447 cmpC Bicarbonate transport ATP-binding protein CmpC... 0.03 OrthoFinder
CRP18069 tauB_2 Taurine import ATP-binding protein TauB [Ensembl]. ABC... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 18 152
No external refs found!