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EDJ90131 (CGSHi22421_03388)


Aliases : CGSHi22421_03388

Description : outer membrane-specific lipoprotein transporter subunit LolE [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90131
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAK99616 spr0812, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.01 OrthoFinder
AAL19070 STM0106, yabJ putative ABC-transport protein [Ensembl]. ABC... 0.03 OrthoFinder
AAL22430 STM3570, ftsE putative ATPase involved in cell division [Ensembl]. ABC... 0.04 OrthoFinder
AGT22144 N559_0325, FtsE cell division protein FtsE [Ensembl]. 0.05 OrthoFinder
AKP15280 metN, WX61_01231 Methionine import ATP-binding protein MetN [Ensembl].... 0.03 OrthoFinder
CPC66089 lolD_1, ERS093114_00989 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 25 173
No external refs found!