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  5. EDJ90389

EDJ90389 (CGSHi22421_01567)


Aliases : CGSHi22421_01567

Description : succinyl-diaminopimelate desuccinylase [Ensembl]. Peptidase family M20/M25/M40, Peptidase dimerisation domain [Interproscan].


Gene families : OG_02_0000461 (OrthoFinder) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90389
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC75525 dapE, b2472 N-succinyl-diaminopimelate deacylase [Ensembl].... 0.02 OrthoFinder
AAK98952 spr0148, dapE Succinyl-diaminopimelic descuccinlyase (ArgE/DapE/Acy1... 0.03 OrthoFinder
AHY40255 CJ8421_05205 succinyl-diaminopimelate desuccinylase [Ensembl].... 0.05 OrthoFinder
KNA50362 VCV51_031435 succinyl-diaminopimelate desuccinylase [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR011650 Peptidase_M20_dimer 176 283
IPR002933 Peptidase_M20 63 372
No external refs found!