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  5. EDJ90516

EDJ90516 (fumC, CGSHi22421_03063)


Aliases : fumC, CGSHi22421_03063

Description : fumarate hydratase [Ensembl]. Lyase, Fumarase C C-terminus [Interproscan].


Gene families : OG_02_0000168 (OrthoFinder) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90516
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC77099 aspA, b4139 aspartate ammonia-lyase [Ensembl]. Lyase, Fumarase C... 0.08 OrthoFinder
AAL20389 STM1469, fumC fumarase C [Ensembl]. Lyase, Fumarase C C-terminus... 0.03 OrthoFinder
AAL23149 STM4326, aspA aspartate ammonia-lyase [Ensembl]. Lyase, Fumarase C... 0.08 OrthoFinder
AHY39360 aspA, CJ8421_00445 aspartate ammonia-lyase [Ensembl]. Lyase, Fumarase C... 0.06 OrthoFinder
AHY40560 fumC, CJ8421_06860 fumarate hydratase [Ensembl]. Lyase, Fumarase C... 0.03 OrthoFinder
CBI66408 aspA, HPB8_851 aspartate ammonia-lyase (AspA) [Ensembl]. Lyase,... 0.03 OrthoFinder
KNA54881 VCV51_031809 aspartate ammonia-lyase [Ensembl]. Lyase, Fumarase C... 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR018951 Fumarase_C_C 408 461
IPR022761 Fumarate_lyase_N 11 342
No external refs found!