EDJ90609 (CGSHi22421_01352)


Aliases : CGSHi22421_01352

Description : probable transcriptional activator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0002443 (OrthoFinder) Phylogenetic Tree(s): OG0002443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90609
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAL23329 STM4511, yjiE putative LysR family transcriptional regulator... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 8 65
IPR005119 LysR_subst-bd 95 291
No external refs found!