EDJ90799 (CGSHi22421_05220)

Aliases : CGSHi22421_05220

Description : L-serine deaminase [Ensembl]. Serine dehydratase beta chain, Serine dehydratase alpha chain [Interproscan].

Gene families : OG_02_0000148 (OrthoFinder) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ90799
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AAC75839	sdaB, b2797	L-serine dehydratase 2 [Ensembl]. Serine dehydratase...	0.04	OrthoFinder
AAL20741	STM1826, sdaA	L-serine deaminase I/L-threonine deaminase I [Ensembl]....	0.03	OrthoFinder
AAL21850	STM2971, sdaB	L-serine dehydratase [Ensembl]. Serine dehydratase beta...	0.06	OrthoFinder
AAL22113	STM3240, tdcG	L-serine deaminase [Ensembl]. Serine dehydratase beta...	0.03	OrthoFinder
AGT22864	N559_1090	L-serine ammonia-lyase [Ensembl].	0.04	OrthoFinder
AHY40798	CJ8421_08130	L-serine dehydratase [Ensembl]. Serine dehydratase beta...	0.05	OrthoFinder
CPC63103	sdhA_2, ERS093114_00898	L-serine dehydratase%2C alpha subunit [Ensembl]. Serine...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003941	L-serine ammonia-lyase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006094	gluconeogenesis	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016840	carbon-nitrogen lyase activity	None	Extended
MF	GO:0016841	ammonia-lyase activity	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	None	Extended
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEA	Interproscan
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	Enrichment
MF	GO:0004427	inorganic diphosphatase activity	IEP	Enrichment
MF	GO:0004470	malic enzyme activity	IEP	Enrichment
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Enrichment
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Enrichment
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
BP	GO:0006004	fucose metabolic process	IEP	Enrichment
BP	GO:0006040	amino sugar metabolic process	IEP	Enrichment
BP	GO:0006050	mannosamine metabolic process	IEP	Enrichment
BP	GO:0006051	N-acetylmannosamine metabolic process	IEP	Enrichment
BP	GO:0006099	tricarboxylic acid cycle	IEP	Enrichment
BP	GO:0006865	amino acid transport	IEP	Enrichment
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Enrichment
MF	GO:0008184	glycogen phosphorylase activity	IEP	Enrichment
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Enrichment
MF	GO:0008736	L-fucose isomerase activity	IEP	Enrichment
MF	GO:0008998	ribonucleoside-triphosphate reductase activity	IEP	Enrichment
BP	GO:0009267	cellular response to starvation	IEP	Enrichment
BP	GO:0009605	response to external stimulus	IEP	Enrichment
BP	GO:0009991	response to extracellular stimulus	IEP	Enrichment
MF	GO:0015129	lactate transmembrane transporter activity	IEP	Enrichment
BP	GO:0015727	lactate transport	IEP	Enrichment
BP	GO:0015849	organic acid transport	IEP	Enrichment
BP	GO:0015850	organic hydroxy compound transport	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016615	malate dehydrogenase activity	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016854	racemase and epimerase activity	IEP	Enrichment
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0031667	response to nutrient levels	IEP	Enrichment
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Enrichment
BP	GO:0031669	cellular response to nutrient levels	IEP	Enrichment
BP	GO:0042594	response to starvation	IEP	Enrichment
MF	GO:0047465	N-acylglucosamine-6-phosphate 2-epimerase activity	IEP	Enrichment
BP	GO:0071496	cellular response to external stimulus	IEP	Enrichment
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	Enrichment
BP	GO:1903825	organic acid transmembrane transport	IEP	Enrichment
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005130	Ser_deHydtase-like_asu	185	449
IPR005131	Ser_deHydtase_bsu	3	156

External Links

No external refs found!

EDJ90799 (CGSHi22421_05220)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation