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Aliases : rph, CGSHi22421_05310
Description : ribonuclease PH [Ensembl]. 3' exoribonuclease family [Interproscan].
Gene families : OG_02_0000180 (OrthoFinder) Phylogenetic Tree(s): OG0000180_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EDJ90817 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AKI49166 | rph, L2625_01256 | ribonuclease PH [Ensembl]. Exoribonuclease [Interproscan]. | 0.04 | OrthoFinder | |
| AKP15593 | WX61_01553 | Non-canonical purine NTP pyrophosphatase [Ensembl]. Ham1... | 0.04 | OrthoFinder | |
| CRO27551 | rph | Ribonuclease PH [Ensembl]. 3' exoribonuclease family... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| BP | GO:0002143 | tRNA wobble position uridine thiolation | IEP | Enrichment |
| MF | GO:0004107 | chorismate synthase activity | IEP | Enrichment |
| MF | GO:0004417 | hydroxyethylthiazole kinase activity | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Enrichment |
| BP | GO:0006563 | L-serine metabolic process | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
| BP | GO:0006772 | thiamine metabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | IEP | Enrichment |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Enrichment |
| BP | GO:0009405 | obsolete pathogenesis | IEP | Enrichment |
| BP | GO:0010033 | response to organic substance | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034227 | tRNA thio-modification | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0042221 | response to chemical | IEP | Enrichment |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | Enrichment |
| BP | GO:0061024 | membrane organization | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |