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  5. EDJ90824

EDJ90824 (CGSHi22421_05345)


Aliases : CGSHi22421_05345

Description : sensory histidine kinase in two-component regulatory system with NarP (NarL) [Ensembl]. HAMP domain, Histidine kinase-, Type IV pili methyl-accepting chemotaxis transducer N-term [Interproscan].


Gene families : OG_02_0000122 (OrthoFinder) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90824
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC74306 narX, b1222 sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AAL22647 STM3789, uhpB sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AGT21899 N559_0070, UhpB sensory histidine kinase UhpB [Ensembl]. dimerisation... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 445 533
IPR011712 Sig_transdc_His_kin_sub3_dim/P 332 399
IPR029095 NarX-like_N 1 96
IPR003660 HAMP_dom 143 191
No external refs found!