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  5. EDJ90863

EDJ90863 (CGSHi22421_05540)


Aliases : CGSHi22421_05540

Description : preprotein translocase subunit SecF [Ensembl]. DEAD/DEAH box helicase, DbpA RNA binding domain, Helicase conserved C-terminal domain [Interproscan].


Gene families : OG_02_0000033 (OrthoFinder) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90863
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC73884 rhlE, b0797 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
AAC75629 srmB, b2576 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
AAC76196 deaD, b3162 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.09 OrthoFinder
AAL19757 STM0820, rhlE putative ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH... 0.04 OrthoFinder
AAL22152 STM3280, deaD cysteine sulfinate desulfinase [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
AAL22764 STM3914, rhlB putative helicase [Ensembl]. DEAD/DEAH box helicase,... 0.03 OrthoFinder
AGT23114 N559_1352, SrmB ATP-dependent RNA helicase SrmB [Ensembl]. Helicase... 0.05 OrthoFinder
AKI48814 L2625_00887 ATP-dependent RNA helicase [Ensembl]. Helicase,... 0.03 OrthoFinder
AKP15465 rhlE_2, WX61_01419 ATP-dependent RNA helicase RhlE [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
CBI66873 deaD, HPB8_1316 putative helicase [Ensembl]. DEAD/DEAH box helicase,... 0.03 OrthoFinder
CCG27185 YqfR ATP-dependent RNA helicase YqfR [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder
CCG27251 No alias Cold-shock DEAD-box protein A [Ensembl]. DEAD/DEAH box... 0.06 OrthoFinder
CCP46027 rhlE, Rv3211 Probable ATP-dependent RNA helicase RhlE [Ensembl].... 0.03 OrthoFinder
CPD23408 ERS093114_02346 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder
KNA55003 VCV51_031733 DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box... 0.1 OrthoFinder
KNA57620 VCV51_030433 DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 231 339
IPR005580 DbpA/CsdA_RNA-bd_dom 479 547
IPR011545 DEAD/DEAH_box_helicase_dom 30 194
No external refs found!