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  5. EDJ90865

EDJ90865 (CGSHi22421_05550)


Aliases : CGSHi22421_05550

Description : polyribonucleotide nucleotidyltransferase [Ensembl]. KH domain, S1 RNA binding domain, 3' exoribonuclease family, Polyribonucleotide nucleotidyltransferase [Interproscan].


Gene families : OG_02_0000552 (OrthoFinder) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90865
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAL22154 STM3282, pnp polynucleotide phosphorylase [Ensembl]. KH domain, S1... 0.1 OrthoFinder
AEA95021 pnp, OG1RF_12334 polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.03 OrthoFinder
AGT22392 N559_0594 polynucleotide phosphorylase/polyadenylase [Ensembl]. S1... 0.05 OrthoFinder
AKI49327 pnp, L2625_01423 polyribonucleotide nucleotidyltransferase [Ensembl]. S1... 0.06 OrthoFinder
AKP15710 pnp, WX61_01675 Polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.04 OrthoFinder
CCL17488 pnp, BN171_1520006 Polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.05 OrthoFinder
CCP45582 gpsI, Rv2783c Bifunctional protein polyribonucleotide... 0.04 OrthoFinder
CRO21175 pnp Polyribonucleotide nucleotidyltransferase [Ensembl]. KH... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0042822 pyridoxal phosphate metabolic process IEP Enrichment
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0046184 aldehyde biosynthetic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 293 425
IPR001247 ExoRNase_PH_dom1 3 113
IPR003029 S1_domain 588 659
IPR015847 ExoRNase_PH_dom2 116 179
IPR015847 ExoRNase_PH_dom2 429 497
IPR004088 KH_dom_type_1 525 583
IPR015848 PNPase_PH_RNA-bd_bac/org-type 211 289
No external refs found!