Aliases : CGSHi22421_03503
Description : peptide ABC transporter permease protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EDJ90883 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73918 | gsiC, b0831 | glutathione ABC transporter permease [Ensembl].... | 0.03 | OrthoFinder | |
AAC74326 | oppB, b1244 | oligopeptide ABC transporter permease [Ensembl].... | 0.02 | OrthoFinder | |
AAC74375 | sapB, b1293 | antimicrobial peptide transport ABC transporter permease... | 0.03 | OrthoFinder | |
AAC76502 | nikB, b3477 | nickel ABC transporter permease [Ensembl].... | 0.03 | OrthoFinder | |
AAC76568 | dppB, b3543 | dipeptide/heme ABC transporter permease [Ensembl].... | 0.03 | OrthoFinder | |
AAL19786 | STM0850, yliC | putative ABC transporter periplasmic binding protein... | 0.02 | OrthoFinder | |
AAL20610 | STM1693, sapB | ABC superfamily peptide transport protein [Ensembl].... | 0.03 | OrthoFinder | |
AAL21120 | STM2217, yejB | putative ABC-type dipeptide/oligopeptide/nickel... | 0.03 | OrthoFinder | |
AAL22490 | STM3629, dppB | dipeptide transport protein 1 [Ensembl].... | 0.04 | OrthoFinder | |
AEA93323 | opp1B, OG1RF_10636 | oligopeptide ABC superfamily ATP binding cassette... | 0.03 | OrthoFinder | |
AEA95055 | opp2B, OG1RF_12368 | oligopeptide ABC superfamily ATP binding cassette... | 0.04 | OrthoFinder | |
AGT22074 | N559_0252, DppB | dipeptide transporter permease DppB [Ensembl].... | 0.03 | OrthoFinder | |
AGT23464 | N559_1722, DppB | putative dipeptide ABC transporter, permease protein... | 0.03 | OrthoFinder | |
AGT23803 | N559_2085 | oligopeptide transporter permease [Ensembl].... | 0.03 | OrthoFinder | |
AGT24128 | N559_2435 | peptide ABC transporter membrane protein [Ensembl].... | 0.03 | OrthoFinder | |
AGT25118 | N559_3467 | peptide ABC transporter membrane protein [Ensembl].... | 0.03 | OrthoFinder | |
AKI48108 | L2625_00135 | oligopeptide ABC transporter, permease protein... | 0.02 | OrthoFinder | |
CBI66820 | dppB, HPB8_1263 | dipeptide ABC transporter, permease protein (DppB)... | 0.03 | OrthoFinder | |
CCG26341 | OppB | Oligopeptide transport system permease protein OppB (TC... | 0.04 | OrthoFinder | |
CCL19135 | appB, BN171_2880002 | ABC-type transport system, oligopeptide-family permease... | 0.03 | OrthoFinder | |
CCP44039 | oppB, Rv1283c | Probable oligopeptide-transport integral membrane... | 0.03 | OrthoFinder | |
CPC32208 | nikB, ERS093114_00035 | nickel transport system permease protein [Ensembl].... | 0.03 | OrthoFinder | |
CPC43926 | oppB_2, ERS093114_00443 | peptide ABC transporter permease [Ensembl].... | 0.02 | OrthoFinder | |
CPC72096 | opp-3B, ERS093114_01158 | oligopeptide permease%2C channel-forming protein... | 0.03 | OrthoFinder | |
CPD17797 | opp-1B, ERS093114_02217 | Oligopeptide transporter putative membrane permease... | 0.03 | OrthoFinder | |
CRO32970 | gsiC | Glutathione transport system permease protein GsiC... | 0.02 | OrthoFinder | |
CRP12152 | dppB | Dipeptide transport system permease protein DppB... | 0.03 | OrthoFinder | |
KNA51872 | VCV51_030402 | binding-protein-dependent transport system inner... | 0.03 | OrthoFinder | |
KNA58586 | VCV51_031121 | binding-protein-dependent transport system inner... | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
MF | GO:0004096 | catalase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004325 | ferrochelatase activity | IEP | Enrichment |
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Enrichment |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Enrichment |
MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
BP | GO:0006541 | glutamine metabolic process | IEP | Enrichment |
BP | GO:0006542 | glutamine biosynthetic process | IEP | Enrichment |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Enrichment |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0006783 | heme biosynthetic process | IEP | Enrichment |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0020037 | heme binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Enrichment |
MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000515 | MetI-like | 93 | 315 |
No external refs found! |