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  5. EDJ90907

EDJ90907 (CGSHi22421_03623)


Aliases : CGSHi22421_03623

Description : predicted ABC-type cobalt transport system, ATPase component [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90907
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC73310 metN, b0199 DL-methionine transporter subunit [Ensembl]. NIL domain,... 0.04 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAC75724 proV, b2677 glycine betaine/proline ABC transporter periplasmic... 0.02 OrthoFinder
AAK99212 spr0408, glnQ ABC transporter ATP-binding protein-glutamine [Ensembl].... 0.06 OrthoFinder
AAK99532 spr0728, glnQ ABC transporter ATP-binding protein-glutamine transport... 0.03 OrthoFinder
AAL00827 spr2025, ABC-NBP ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AAL19210 STM0247, abc putative ABC superfamily (atp_bind) transport system... 0.03 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.04 OrthoFinder
AEA93182 OG1RF_10495 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA94605 metN, OG1RF_11918 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT23905 N559_2193 putative ABC transporter [Ensembl]. 0.04 OrthoFinder
AHY40116 CJ8421_04465 amino acid ABC transporter ATP-binding protein... 0.03 OrthoFinder
AKI48796 glnQ, L2625_00869 glutamine ABC transporter, ATP-binding protein... 0.04 OrthoFinder
CCG26326 No alias Amino acid transport ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CCG26400 No alias ATPase component of general energizing module of ECF... 0.04 OrthoFinder
CCG26401 No alias ATPase component of general energizing module of ECF... 0.04 OrthoFinder
CCG26410 No alias ABC-type polar amino acid transport system,ATPase... 0.03 OrthoFinder
CCL16929 BN171_1000003 ABC-type transport system, aminoacid-family ATP-binding... 0.03 OrthoFinder
CRP72682 metN_4 Methionine import ATP-binding protein MetN [Ensembl].... 0.03 OrthoFinder
KNA53743 VCV51_033269 amino acid ABC transporter [Ensembl]. ABC transporter... 0.05 OrthoFinder
KNA56297 VCV51_030617 D-methionine ABC transporter [Ensembl]. NIL domain, ABC... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1990397 queuosine salvage IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 18 164
No external refs found!