EDJ91176 (CGSHi22421_10557)

Aliases : CGSHi22421_10557

Description : translation initiation factor IF-2 [Ensembl]. Elongation factor Tu domain 2, Translation-initiation factor 2 [Interproscan].

Gene families : OG_02_0000609 (OrthoFinder) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ91176
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC76202 infB, b3168 translation initiation factor IF-2 [Ensembl].... 0.1 OrthoFinder
AAL22158 STM3286, infB protein chain initiation factor IF-2 [Ensembl].... 0.07 OrthoFinder
ADK86795 infB, MPNE_0183 translation initiation factor IF-2 [Ensembl].... 0.03 OrthoFinder
AKI49321 infB, L2625_01415 translation initiation factor IF-2 [Ensembl].... 0.07 OrthoFinder
AKP14352 infB, WX61_00264 Translation initiation factor IF-2 [Ensembl].... 0.06 OrthoFinder
CCP45640 infB, Rv2839c Probable translation initiation factor if-2 InfB... 0.03 OrthoFinder
CRO21030 infB Translation initiation factor IF-2 [Ensembl].... 0.05 OrthoFinder
KNA57720 VCV51_030413 translation initiation factor IF-2 [Ensembl].... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
BP GO:0042158 lipoprotein biosynthetic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR023115 TIF_IF2_dom3 2 103
IPR004161 EFTu-like_2 134 200
No external refs found!