EDJ91278 (CGSHi22421_02129)

Aliases : CGSHi22421_02129

Description : formate dehydrogenase, cytochrome B556 subunit [Ensembl]. Prokaryotic cytochrome b561 [Interproscan].

Gene families : OG_02_0000938 (OrthoFinder) Phylogenetic Tree(s): OG0000938_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ91278
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAD13454 fdoI, b3892 formate dehydrogenase-O, cytochrome b556 subunit... 0.04 OrthoFinder
AAL22874 STM4035, fdoI formate dehydrogenase, cytochrome B556 (FDO) subunit... 0.04 OrthoFinder
AGT26669 N559_5093 formate dehydrogenase-O subunit gamma [Ensembl]. 0.03 OrthoFinder
CRO50084 fdoI Formate dehydrogenase-O subunit gamma [Ensembl].... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
InterPro domains Description Start Stop
IPR011577 Cyt_b561_bac/Ni-Hgenase 14 83
No external refs found!