EDJ91363 (CGSHi22421_04648)


Aliases : CGSHi22421_04648

Description : 30S ribosomal protein S17 [Ensembl]. Ribosomal protein S17 [Interproscan].


Gene families : OG_02_0000567 (OrthoFinder) Phylogenetic Tree(s): OG0000567_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91363
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76336 rpsQ, b3311 30S ribosomal subunit protein S17 [Ensembl]. Ribosomal... 0.31 OrthoFinder
AAK99002 spr0198, rpsQ 30S Ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
AAL22294 STM3431, rpsQ 30S ribosomal subunit protein S17 [Ensembl]. Ribosomal... 0.33 OrthoFinder
ADK87159 rpsQ, MPNE_0203 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
AEA92847 rpsQ, OG1RF_10160 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AHY40883 rpsQ, CJ8421_08555 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AKI50558 rpsQ, L2625_02768 ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
AKP15132 rpsQ, WX61_01078 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
CBI65726 rpsQ, HPB8_169 small subunit ribosomal protein S17 [Ensembl]. Ribosomal... 0.08 OrthoFinder
CCG27388 No alias SSU ribosomal protein S17p (S11e) [Ensembl]. Ribosomal... 0.25 OrthoFinder
CCL20572 rpsQ, BN171_70012 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
CCP43454 rpsQ, Rv0710 30S ribosomal protein S17 RpsQ [Ensembl]. Ribosomal... 0.14 OrthoFinder
CRO74018 rpsQ 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
KNA54981 VCV51_033164 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 10 76
No external refs found!