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  5. EDJ91373

EDJ91373 (rpsE, CGSHi22421_04698)


Aliases : rpsE, CGSHi22421_04698

Description : 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5 [Interproscan].


Gene families : OG_02_0000394 (OrthoFinder) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91373
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76328 rpsE, b3303 30S ribosomal subunit protein S5 [Ensembl]. Ribosomal... 0.35 OrthoFinder
AAK99010 spr0206, rpsE 30S Ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.28 OrthoFinder
AAL22286 STM3423, rpsE 30S ribosomal subunit protein S5 [Ensembl]. Ribosomal... 0.4 OrthoFinder
ADK86962 rpsE, MPNE_0211 ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.22 OrthoFinder
AEA92855 rpsE, OG1RF_10168 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.25 OrthoFinder
AGT22259 N559_0451 30S ribosomal protein S5 [Ensembl]. C-terminal domain,... 0.21 OrthoFinder
AHY40875 rpsE, CJ8421_08515 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.3 OrthoFinder
AKI50550 rpsE, L2625_02760 ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.19 OrthoFinder
AKP15139 rpsE, WX61_01085 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.11 OrthoFinder
CBI65734 rpsE, HPB8_177 small subunit ribosomal protein S5 [Ensembl]. Ribosomal... 0.21 OrthoFinder
CCG27396 No alias SSU ribosomal protein S5p (S2e) [Ensembl]. Ribosomal... 0.19 OrthoFinder
CCL20580 rpsE, BN171_70020 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.29 OrthoFinder
CCP43465 rpsE, Rv0721 30S ribosomal protein S5 RpsE [Ensembl]. Ribosomal... 0.12 OrthoFinder
CPD14101 rpsE, ERS093114_02139 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.31 OrthoFinder
CRO74251 rpsE 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.2 OrthoFinder
KNA54989 VCV51_033172 ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.26 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 87 157
IPR013810 Ribosomal_S5_N 11 74
No external refs found!