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  5. EDJ91697

EDJ91697 (secA, CGSHi22421_08078)


Aliases : secA, CGSHi22421_08078

Description : preprotein translocase subunit SecA [Ensembl]. Ribosomal protein S2 [Interproscan].


Gene families : OG_02_0000332 (OrthoFinder) Phylogenetic Tree(s): OG0000332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91697
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC73280 rpsB, b0169 30S ribosomal subunit protein S2 [Ensembl]. Ribosomal... 0.08 OrthoFinder
AAL00822 spr2020, rpsB 30S Ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.03 OrthoFinder
AAL19180 STM0216, rpsB 30S ribosomal subunit protein S2 [Ensembl]. Ribosomal... 0.07 OrthoFinder
ADK87275 rpsB, MPNE_0240 ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.05 OrthoFinder
AEA94520 rpsB, OG1RF_11833 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.05 OrthoFinder
AGT25854 N559_4232 30S ribosomal protein S2 [Ensembl]. 0.04 OrthoFinder
AHY40386 rpsB, CJ8421_05895 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.04 OrthoFinder
AKI49655 rpsB, L2625_01768 ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.03 OrthoFinder
AKP14987 rpsB, WX61_00924 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.04 OrthoFinder
CCG26655 No alias SSU ribosomal protein S2p (SAe) [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCP45692 rpsB, Rv2890c 30S ribosomal protein S2 RpsB [Ensembl]. Ribosomal... 0.03 OrthoFinder
CPC35319 rpsB, ERS093114_00168 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.04 OrthoFinder
CRO13952 rpsB 30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.06 OrthoFinder
KNA52712 VCV51_031518 ribosomal protein S2 [Ensembl]. Ribosomal protein S2... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1990397 queuosine salvage IEP Enrichment
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 9 133
No external refs found!