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  5. EDJ91906

EDJ91906 (CGSHi22421_09123)


Aliases : CGSHi22421_09123

Description : D-xylose ABC transporter permease protein [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].


Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91906
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC74587 lsrC, b1514 autoinducer 2 import system permease protein [Ensembl].... 0.03 OrthoFinder
AAC74588 lsrD, b1515 autoinducer 2 import system permease protein [Ensembl].... 0.03 OrthoFinder
AAC75209 mglC, b2148 methyl-galactoside transporter subunit [Ensembl].... 0.09 OrthoFinder
AAC75599 yphD, b2546 putative sugar ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC76592 xylH, b3568 D-xylose ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC76773 rbsC, b3750 D-ribose ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAL21092 STM2188, mglC methyl-galactoside transport protein [Ensembl].... 0.05 OrthoFinder
AGT23414 N559_1670 beta-methylgalactoside transporter inner membrane... 0.03 OrthoFinder
AGT25326 N559_3686 putative ABC-type sugar transport system permease... 0.03 OrthoFinder
AGT25327 N559_3687 putative inner-membrane translocator [Ensembl]. 0.03 OrthoFinder
AGT25343 N559_3703 inner-membrane translocator [Ensembl]. 0.03 OrthoFinder
AGT25371 N559_3733 sugar ABC transporter permease [Ensembl]. 0.05 OrthoFinder
AGT26147 N559_4544 ribose high-affinity ABC transporter permease component... 0.03 OrthoFinder
AGT26266 N559_4672, YjfF inner membrane ABC transporter permease YjfF [Ensembl]. 0.03 OrthoFinder
AGT26267 N559_4673 sugar ABC transporter membrane protein [Ensembl]. 0.04 OrthoFinder
AGT26396 N559_4806 putative carbohydrate ABC transport system permease [Ensembl]. 0.03 OrthoFinder
CCL17792 BN171_1800015 ABC-type transport system, sugar-family permease... 0.03 OrthoFinder
KNA55655 VCV51_030971 branched-chain amino acid transport system/permease... 0.03 OrthoFinder
KNA60662 VCV51_032101 branched-chain amino acid transport system/permease... 0.07 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006004 fucose metabolic process IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008736 L-fucose isomerase activity IEP Enrichment
MF GO:0008927 mannonate dehydratase activity IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 4 148
No external refs found!