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Aliases : trpA, HPB8_203
Description : tryptophan synthase alpha chain [Ensembl]. Tryptophan synthase alpha chain [Interproscan].
Gene families : OG_02_0000714 (OrthoFinder) Phylogenetic Tree(s): OG0000714_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CBI65760 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AKP15622 | trpA, WX61_01584 | Tryptophan synthase alpha chain [Ensembl]. Tryptophan... | 0.03 | OrthoFinder | |
| CRP69127 | trpA | Tryptophan synthase alpha chain [Ensembl]. Tryptophan... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004834 | tryptophan synthase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | IEP | Enrichment |
| MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
| MF | GO:0008685 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | IEP | Enrichment |
| CC | GO:0009360 | DNA polymerase III complex | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Enrichment |
| CC | GO:0042575 | DNA polymerase complex | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002028 | Trp_synthase_suA | 7 | 260 |
| UniProtKB | D7FC53 |