Aliases : rluA, HPB8_590
Description : pseudouridylate synthase [Ensembl]. RNA pseudouridylate synthase [Interproscan].
Gene families : OG_02_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CBI66147 | |
Cluster | HCCA: Cluster_1 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74170 | rluC, b1086 | 23S rRNA pseudouridine(955,2504,2580) synthase... | 0.03 | OrthoFinder | |
AAK99634 | spr0830, rluD | 23S rRNA pseudouridine synthase (supresses ftsH(ts)... | 0.03 | OrthoFinder | |
AAL20116 | STM1187, rluC | 23S rRNA pseudouridylate synthase [Ensembl]. S4 domain,... | 0.05 | OrthoFinder | |
AEA94120 | rluD, OG1RF_11433 | ribosomal large subunit pseudouridine synthase D... | 0.03 | OrthoFinder | |
AEA94726 | rluD2, OG1RF_12039 | 23S rRNA pseudouridylate synthase RluD [Ensembl]. RNA... | 0.03 | OrthoFinder | |
AKP15182 | rluC, WX61_01129 | Ribosomal large subunit pseudouridine synthase C... | 0.04 | OrthoFinder | |
CCG26434 | YhcT | Similar to ribosomal large subunit pseudouridine... | 0.03 | OrthoFinder | |
CCP44304 | Rv1540 | Conserved hypothetical protein member of yabO/yceC/yfiI... | 0.02 | OrthoFinder | |
CRN66355 | rluD | Ribosomal large subunit pseudouridine synthase D... | 0.02 | OrthoFinder | |
CRO95170 | rluA_1 | Ribosomal large subunit pseudouridine synthase A... | 0.03 | OrthoFinder | |
EDJ91587 | CGSHi22421_07447 | 23S rRNA pseudouridylate synthase C [Ensembl]. S4... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
MF | GO:0008417 | fucosyltransferase activity | IEP | Enrichment |
MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0036211 | protein modification process | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
BP | GO:0070085 | glycosylation | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006145 | PsdUridine_synth_RsuA/RluA | 87 | 197 |
UniProtKB | D7FD90 |