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  5. AHY40876

AHY40876 (rplR, CJ8421_08520)


Aliases : rplR, CJ8421_08520

Description : 50S ribosomal protein L18 [Ensembl]. Ribosomal L18 of archaea [Interproscan].


Gene families : OG_02_0000945 (OrthoFinder) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40876
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76329 rplR, b3304 50S ribosomal subunit protein L18 [Ensembl]. Ribosomal... 0.26 OrthoFinder
AAL22287 STM3424, rplR 50S ribosomal subunit protein L18 [Ensembl]. Ribosomal... 0.33 OrthoFinder
ADK86776 rplR, MPNE_0210 ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.16 OrthoFinder
AGT22258 N559_0450 50S ribosomal protein L18 [Ensembl]. 0.19 OrthoFinder
CBI65733 rplR, HPB8_176 large subunit ribosomal protein L18 [Ensembl]. Ribosomal... 0.21 OrthoFinder
CCP43464 rplR, Rv0720 50S ribosomal protein L18 RplR [Ensembl]. Ribosomal L18... 0.13 OrthoFinder
CPD14066 rplR, ERS093114_02138 50S ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.31 OrthoFinder
CRO74217 rplR hypothetical protein [Ensembl]. Ribosomal L18 of archaea... 0.25 OrthoFinder
EDJ91372 rplR, CGSHi22421_04693 50S ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.24 OrthoFinder
KNA54988 VCV51_033171 ribosomal protein L18 [Ensembl]. Ribosomal L18 of... 0.25 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 9 117
No external refs found!