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  5. AHY40898

AHY40898 (CJ8421_08630)


Aliases : CJ8421_08630

Description : ribosomal RNA large subunit methyltransferase N [Ensembl]. Radical SAM superfamily [Interproscan].


Gene families : OG_02_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40898
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC75570 rlmN, b2517 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37... 0.06 OrthoFinder
AAK99480 spr0676 Conserved hypothetical protein [Ensembl]. Radical SAM... 0.05 OrthoFinder
AAL21419 STM2525, yfgB putative Fe-S-cluster redox enzyme [Ensembl]. Radical... 0.04 OrthoFinder
AGT23166 N559_1408 ribosomal RNA large subunit methyltransferase N... 0.04 OrthoFinder
AKP14193 rlmN, WX61_00104 Dual-specificity RNA methyltransferase RlmN [Ensembl].... 0.04 OrthoFinder
CBI65673 rlmN, HPB8_116 Ribosomal RNA large subunit methyltransferase N... 0.04 OrthoFinder
CCG26641 No alias Ribosomal RNA large subunit methyltransferase N... 0.04 OrthoFinder
CCL19041 BN171_2830009 Putative radical SAM-family protein [Ensembl]. Radical... 0.05 OrthoFinder
CPC36540 rlmN, ERS093114_00206 Ribosomal RNA large subunit methyltransferase N... 0.03 OrthoFinder
KNA56869 VCV51_030504 cfr family radical SAM enzyme [Ensembl]. Radical SAM... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 96 264
No external refs found!