AGT22179 (N559_0365, GlpR)

Aliases : N559_0365, GlpR

Description : DNA-binding transcriptional repressor GlpR [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain, DeoR-type HTH domain [InterProScan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22179
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AAC74840	ydjF, b1770	putative DNA-binding transcriptional regulator...	0.03	OrthoFinder
AAL21799	STM2919, ygbI	putative regulatory protein, deoR family [Ensembl]. DeoR...	0.03	OrthoFinder
AAL22384	STM3523, glpR	transcriptional repressor of the glp operon [Ensembl]....	0.04	OrthoFinder
AAL23201	STM4381, yjfQ	putative transcriptional repressor [Ensembl]. DeoR C...	0.03	OrthoFinder
AKP15542	glpR, WX61_01502	Glycerol-3-phosphate regulon repressor [Ensembl]. DeoR C...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0008616	queuosine biosynthetic process	IEP	Enrichment
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Enrichment
BP	GO:0009163	nucleoside biosynthetic process	IEP	Enrichment
BP	GO:0009254	peptidoglycan turnover	IEP	Enrichment
BP	GO:0009451	RNA modification	IEP	Enrichment
MF	GO:0009982	pseudouridine synthase activity	IEP	Enrichment
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0016657	oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0016866	intramolecular transferase activity	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
BP	GO:0032506	cytokinetic process	IEP	Enrichment
MF	GO:0033739	preQ1 synthase activity	IEP	Enrichment
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Enrichment
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Enrichment
BP	GO:0043165	Gram-negative-bacterium-type cell outer membrane assembly	IEP	Enrichment
BP	GO:0046116	queuosine metabolic process	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
BP	GO:0061024	membrane organization	IEP	Enrichment
BP	GO:0071709	membrane assembly	IEP	Enrichment
BP	GO:0071805	potassium ion transmembrane transport	IEP	Enrichment
BP	GO:0090529	cell septum assembly	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR014036	DeoR_C	74	231
IPR001034	DeoR_HTH	6	61

External Links

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AGT22179 (N559_0365, GlpR)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation