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AGT22205 (N559_0392, HofQ)


Aliases : N559_0392, HofQ

Description : outer membrane porin HofQ [Ensembl]. Bacterial type II/III secretion system short domain [InterProScan].


Gene families : OG_02_0001437 (OrthoFinder) Phylogenetic Tree(s): OG0001437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22205
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC76416 hofQ, b3391 DNA catabolic putative fimbrial transporter [Ensembl].... 0.06 OrthoFinder
AAL22350 STM3488, hofQ putative transport protein [Ensembl]. Bacterial type II... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009306 protein secretion IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR005644 NolW-like 123 180
IPR004846 T2SS/T3SS 252 411
No external refs found!