Aliases : N559_0980
Description : putative binding-protein-dependent transport systems inner membrane component [Ensembl]. transmembrane domain MetI-like [InterProScan].
Gene families : OG_02_0000063 (OrthoFinder) Phylogenetic Tree(s): OG0000063_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AGT22767 | |
Cluster | HCCA: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL00329 | spr1525, ABC-MSP | ABC transporter membrane-spanning permease-sugar... | 0.05 | OrthoFinder | |
AAL22415 | STM3555, ugpE | sn-glycerol 3-phosphate transport protein [Ensembl].... | 0.03 | OrthoFinder | |
AEA94459 | OG1RF_11772 | sugar ABC superfamily ATP binding cassette transporter,... | 0.03 | OrthoFinder | |
AKI48148 | L2625_00176 | sugar ABC transporter, permease protein [Ensembl]. ABC... | 0.02 | OrthoFinder | |
CCG26273 | No alias | ABC transporter, predicted N-acetylneuraminate transport... | 0.04 | OrthoFinder | |
CCG27677 | MalG | Maltose/maltodextrin ABC transporter, permease protein... | 0.03 | OrthoFinder | |
CRO44784 | ycjP | Inner membrane ABC transporter permease protein YcjP... | 0.03 | OrthoFinder | |
CRP18444 | araQ | L-arabinose transport system permease protein AraQ... | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0004371 | glycerone kinase activity | IEP | Enrichment |
BP | GO:0006063 | uronic acid metabolic process | IEP | Enrichment |
BP | GO:0006064 | glucuronate catabolic process | IEP | Enrichment |
BP | GO:0006071 | glycerol metabolic process | IEP | Enrichment |
MF | GO:0008880 | glucuronate isomerase activity | IEP | Enrichment |
MF | GO:0008927 | mannonate dehydratase activity | IEP | Enrichment |
BP | GO:0009056 | catabolic process | IEP | Enrichment |
BP | GO:0010393 | galacturonan metabolic process | IEP | Enrichment |
BP | GO:0016054 | organic acid catabolic process | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016829 | lyase activity | IEP | Enrichment |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Enrichment |
BP | GO:0019400 | alditol metabolic process | IEP | Enrichment |
BP | GO:0019585 | glucuronate metabolic process | IEP | Enrichment |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Enrichment |
BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
BP | GO:0045488 | pectin metabolic process | IEP | Enrichment |
BP | GO:0045490 | pectin catabolic process | IEP | Enrichment |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Enrichment |
MF | GO:0047487 | oligogalacturonide lyase activity | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Enrichment |
BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000515 | MetI-like | 119 | 294 |
No external refs found! |