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  5. AGT22767

AGT22767 (N559_0980)


Aliases : N559_0980

Description : putative binding-protein-dependent transport systems inner membrane component [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000063 (OrthoFinder) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22767
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAL00329 spr1525, ABC-MSP ABC transporter membrane-spanning permease-sugar... 0.05 OrthoFinder
AAL22415 STM3555, ugpE sn-glycerol 3-phosphate transport protein [Ensembl].... 0.03 OrthoFinder
AEA94459 OG1RF_11772 sugar ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AKI48148 L2625_00176 sugar ABC transporter, permease protein [Ensembl]. ABC... 0.02 OrthoFinder
CCG26273 No alias ABC transporter, predicted N-acetylneuraminate transport... 0.04 OrthoFinder
CCG27677 MalG Maltose/maltodextrin ABC transporter, permease protein... 0.03 OrthoFinder
CRO44784 ycjP Inner membrane ABC transporter permease protein YcjP... 0.03 OrthoFinder
CRP18444 araQ L-arabinose transport system permease protein AraQ... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
BP GO:0006063 uronic acid metabolic process IEP Enrichment
BP GO:0006064 glucuronate catabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
MF GO:0008880 glucuronate isomerase activity IEP Enrichment
MF GO:0008927 mannonate dehydratase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0010393 galacturonan metabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019585 glucuronate metabolic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0045488 pectin metabolic process IEP Enrichment
BP GO:0045490 pectin catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0047487 oligogalacturonide lyase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 119 294
No external refs found!