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  5. AGT22773

AGT22773 (N559_0987)


Aliases : N559_0987

Description : putative PTS family enzyme IIC component [Ensembl].


Gene families : OG_02_0000049 (OrthoFinder) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22773
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAK99086 spr0282, PTS-EII Phosphotransferase system sugar-specific EII component... 0.03 OrthoFinder
AAK99225 spr0421, PTS-EII Phosphotransferase system sugar-specific EII component... 0.03 OrthoFinder
AAK99873 spr1070, lacE PTS system, lactose-specific IIBC component [Ensembl].... 0.04 OrthoFinder
AAL00637 spr1834, ptcC Phosphotransferase system system, cellobiose-specific... 0.03 OrthoFinder
AEA92922 celB, OG1RF_10235 PTS family... 0.03 OrthoFinder
AEA93433 OG1RF_10746 PTS family lactose/cellobiose porter component IIC... 0.04 OrthoFinder
AEA93439 OG1RF_10752 PTS family lactose/cellobiose (lac) porter component IIC... 0.04 OrthoFinder
AGT22929 N559_1160 putative phosphotransferase protein [Ensembl]. 0.04 OrthoFinder
AKI48269 L2625_00322 PTS system, IIC component [Ensembl]. Phosphotransferase... 0.04 OrthoFinder
AKI48824 L2625_00898 PTS system, beta-glucoside-specific, IIC component... 0.03 OrthoFinder
AKI50619 L2625_02829 PTS system, beta-glucoside-specific, IIC component... 0.03 OrthoFinder
AKI50645 L2625_02856 PTS system, cellobiose-specific, IIC component, putative... 0.05 OrthoFinder
AKI50701 L2625_02917 PTS system, cellobiose-specific, IIC component... 0.04 OrthoFinder
AKI50720 L2625_02936 PTS system, beta-glucoside-specific, IIC component... 0.04 OrthoFinder
CCG26296 No alias PTS system, cellobiose-specific IIC component [Ensembl].... 0.04 OrthoFinder
CCG26387 No alias PTS system, lactose-specific IIB component / PTS system,... 0.05 OrthoFinder
CCL19893 BN171_3590014 PTS system, lactose/cellobiose-family IIC component... 0.03 OrthoFinder
CPD15556 lacE, ERS093114_02179 PTS system lactose-specific transporter subunit IIBC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR003352 PTS_EIIC 29 360
No external refs found!