AGT22920 (N559_1151)

Aliases : N559_1151

Description : putative LysR-family transcriptional regulator [Ensembl]. LysR substrate binding domain, lysR family [InterProScan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22920
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AAC75590	hcaR, b2537	hca operon transcriptional regulator [Ensembl]. LysR...	0.04	OrthoFinder
AAL22693	STM3834	putative LysR family transcriptional regulator...	0.05	OrthoFinder
AAL23094	STM4270	putative LysR family transcriptional regulator...	0.03	OrthoFinder
AEA94055	OG1RF_11368	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AKP14648	cysB, WX61_00569	HTH-type transcriptional regulator CysB [Ensembl]. LysR...	0.02	OrthoFinder
CCL19137	BN171_2880004	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.04	OrthoFinder
CRN91471	yofA_1	HTH-type transcriptional regulator YofA [Ensembl]. LysR...	0.03	OrthoFinder
CRP00540	cysL_3	CysJI operon transcriptional activator [Ensembl]. LysR...	0.04	OrthoFinder
CRP53545	cynR_8	Cyn operon transcriptional activator [Ensembl]. LysR...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004371	glycerone kinase activity	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
BP	GO:0006071	glycerol metabolic process	IEP	Enrichment
BP	GO:0006835	dicarboxylic acid transport	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Enrichment
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Enrichment
BP	GO:0015740	C4-dicarboxylate transport	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
BP	GO:0019400	alditol metabolic process	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005119	LysR_subst-bd	88	292
IPR000847	Tscrpt_reg_HTH_LysR	3	61

External Links

No external refs found!