Coexpression cluster: Cluster_19 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0065007 biological regulation 27.91% (24/86) 2.02 0.0 0.0
GO:0050789 regulation of biological process 27.91% (24/86) 2.04 0.0 0.0
GO:0050794 regulation of cellular process 27.91% (24/86) 2.05 0.0 0.0
GO:0060255 regulation of macromolecule metabolic process 24.42% (21/86) 2.03 0.0 0.0
GO:0019222 regulation of metabolic process 24.42% (21/86) 2.03 0.0 0.0
GO:0031323 regulation of cellular metabolic process 24.42% (21/86) 2.03 0.0 0.0
GO:0031326 regulation of cellular biosynthetic process 24.42% (21/86) 2.04 0.0 0.0
GO:0051171 regulation of nitrogen compound metabolic process 24.42% (21/86) 2.04 0.0 0.0
GO:0080090 regulation of primary metabolic process 24.42% (21/86) 2.04 0.0 0.0
GO:0010556 regulation of macromolecule biosynthetic process 24.42% (21/86) 2.04 0.0 0.0
GO:0009889 regulation of biosynthetic process 24.42% (21/86) 2.04 0.0 0.0
GO:2000112 regulation of cellular macromolecule biosynthetic process 24.42% (21/86) 2.04 0.0 0.0
GO:0019219 regulation of nucleobase-containing compound metabolic process 24.42% (21/86) 2.04 0.0 0.0
GO:0010468 regulation of gene expression 24.42% (21/86) 2.05 0.0 0.0
GO:2001141 regulation of RNA biosynthetic process 24.42% (21/86) 2.05 0.0 0.0
GO:0051252 regulation of RNA metabolic process 24.42% (21/86) 2.05 0.0 0.0
GO:1903506 regulation of nucleic acid-templated transcription 24.42% (21/86) 2.05 0.0 0.0
GO:0006355 regulation of transcription, DNA-templated 24.42% (21/86) 2.05 0.0 0.0
GO:0008643 carbohydrate transport 8.14% (7/86) 2.39 0.000339 0.002766
GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system 6.98% (6/86) 2.51 0.000582 0.004513
GO:0008150 biological_process 47.67% (41/86) 0.6 0.001065 0.007863
GO:0140110 transcription regulator activity 11.63% (10/86) 1.63 0.001297 0.008743
GO:0003700 DNA-binding transcription factor activity 11.63% (10/86) 1.64 0.001247 0.008786
GO:0003677 DNA binding 12.79% (11/86) 1.5 0.001578 0.010189
GO:0071702 organic substance transport 9.3% (8/86) 1.72 0.002731 0.016932
GO:0007165 signal transduction 5.81% (5/86) 2.32 0.003091 0.018425
GO:0000160 phosphorelay signal transduction system 4.65% (4/86) 2.54 0.004614 0.026486
GO:0035556 intracellular signal transduction 4.65% (4/86) 2.51 0.005035 0.027873
GO:0015144 carbohydrate transmembrane transporter activity 4.65% (4/86) 2.48 0.005482 0.029299
GO:0043565 sequence-specific DNA binding 4.65% (4/86) 2.44 0.005954 0.030764
GO:0016021 integral component of membrane 10.47% (9/86) 1.34 0.008485 0.0411
GO:0031224 intrinsic component of membrane 10.47% (9/86) 1.34 0.008485 0.0411
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_1 0.034 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_13 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_33 0.038 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_34 0.031 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_35 0.029 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_37 0.042 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_38 0.028 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_41 0.031 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_1 0.046 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_8 0.058 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_16 0.05 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_17 0.03 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_26 0.034 OrthoFinder Compare
Escherichia coli HCCA Cluster_3 0.041 OrthoFinder Compare
Escherichia coli HCCA Cluster_10 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_26 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_30 0.08 OrthoFinder Compare
Escherichia coli HCCA Cluster_39 0.036 OrthoFinder Compare
Escherichia coli HCCA Cluster_42 0.041 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_2 0.034 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_4 0.027 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_5 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_5 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_21 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_30 0.044 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_33 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_42 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_51 0.042 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_3 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_4 0.029 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_8 0.037 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_17 0.043 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_22 0.055 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_23 0.039 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_12 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_20 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_50 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_55 0.039 OrthoFinder Compare
Salmonella enterica HCCA Cluster_6 0.033 OrthoFinder Compare
Salmonella enterica HCCA Cluster_30 0.034 OrthoFinder Compare
Salmonella enterica HCCA Cluster_32 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_34 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_35 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_38 0.033 OrthoFinder Compare
Salmonella enterica HCCA Cluster_41 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_46 0.098 OrthoFinder Compare
Salmonella enterica HCCA Cluster_48 0.043 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_6 0.054 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_8 0.04 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_2 0.043 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_21 0.029 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_33 0.036 OrthoFinder Compare
Sequences (86) (download table)

InterPro Domains

GO Terms

Family Terms