AGT22944 (N559_1177)

Aliases : N559_1177

Description : hydrogenase 3, large subunit (part of FHL complex) [Ensembl].

Gene families : OG_02_0002901 (OrthoFinder) Phylogenetic Tree(s): OG0002901_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22944
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AAC75763	hycE, b2721	hydrogenase 3, large subunit [Ensembl]. Nickel-dependent...	0.15	OrthoFinder
AAL21729	STM2849, hycE	hydrogenase 3, large subunit [Ensembl]. Nickel-dependent...	0.15	OrthoFinder
CCP42812	hycE, Rv0087	Possible formate hydrogenase HycE (FHL) [Ensembl]....	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEA	Interproscan
MF	GO:0009055	electron transfer activity	None	Extended
MF	GO:0016151	nickel cation binding	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEA	Interproscan
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048038	quinone binding	IEA	Interproscan
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
MF	GO:0051287	NAD binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
MF	GO:0015099	nickel cation transmembrane transporter activity	IEP	Enrichment
BP	GO:0015675	nickel cation transport	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016831	carboxy-lyase activity	IEP	Enrichment
BP	GO:0035444	nickel cation transmembrane transport	IEP	Enrichment
BP	GO:0042180	cellular ketone metabolic process	IEP	Enrichment
BP	GO:0042181	ketone biosynthetic process	IEP	Enrichment
MF	GO:0043546	molybdopterin cofactor binding	IEP	Enrichment
BP	GO:0045149	acetoin metabolic process	IEP	Enrichment
BP	GO:0045151	acetoin biosynthetic process	IEP	Enrichment
BP	GO:0046165	alcohol biosynthetic process	IEP	Enrichment
MF	GO:0047605	acetolactate decarboxylase activity	IEP	Enrichment
BP	GO:0051301	cell division	IEP	Enrichment
BP	GO:0051604	protein maturation	IEP	Enrichment
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Enrichment
BP	GO:1902652	secondary alcohol metabolic process	IEP	Enrichment
BP	GO:1902653	secondary alcohol biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001501	Ni-dep_hyd_lsu	218	286
IPR001268	NADH_UbQ_OxRdtase_30kDa_su	36	152
IPR001135	NADH_Q_OxRdtase_suD	296	464
IPR001135	NADH_Q_OxRdtase_suD	468	537

External Links

No external refs found!