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  5. AGT22989

AGT22989 (N559_1225)


Aliases : N559_1225

Description : ATP-binding component of transport system for glycine, betaine and proline [Ensembl]. CBS domain [InterProScan].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22989
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AAC73310 metN, b0199 DL-methionine transporter subunit [Ensembl]. NIL domain,... 0.05 OrthoFinder
AAC73753 gltL, b0652 glutamate/aspartate ABC transporter ATPase [Ensembl].... 0.06 OrthoFinder
AAC73951 artP, b0864 arginine ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.07 OrthoFinder
AAC75366 hisP, b2306 histidine ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAC75724 proV, b2677 glycine betaine/proline ABC transporter periplasmic... 0.06 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.05 OrthoFinder
AAL19613 STM0662, gltL glutamate/aspartate transporter [Ensembl]. ABC... 0.05 OrthoFinder
AAL21252 STM2351, hisP histidine and lysine/arginine/ornithine transport... 0.04 OrthoFinder
AEA93585 OG1RF_10898 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT24090 N559_2393 putative ATP-binding component of a transport system [Ensembl]. 0.04 OrthoFinder
AGT24221 N559_2539 ATP-binding component of histidine transport [Ensembl]. 0.04 OrthoFinder
AGT24560 N559_2893 ABC transporter, ATP-binding protein [Ensembl]. NIL... 0.05 OrthoFinder
AGT25146 N559_3495 glutamine ABC transporter ATP-binding protein [Ensembl]. 0.04 OrthoFinder
AGT25388 N559_3752 putative ABC transporter [Ensembl]. 0.07 OrthoFinder
AKP14952 glnQ_1, WX61_00886 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.02 OrthoFinder
CCG26870 No alias Glutamate transport ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CPD30941 glnQ, ERS093114_02522 Glutamine transport ATP-binding protein glnQ [Ensembl].... 0.03 OrthoFinder
CRO39434 glnQ_1 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.03 OrthoFinder
CRP47492 opuAA Glycine betaine transport ATP-binding protein OpuAA... 0.04 OrthoFinder
EDJ90650 CGSHi22421_04053 arginine transport ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
KNA53743 VCV51_033269 amino acid ABC transporter [Ensembl]. ABC transporter... 0.04 OrthoFinder
KNA56297 VCV51_030617 D-methionine ABC transporter [Ensembl]. NIL domain, ABC... 0.02 OrthoFinder
KNA59809 VCV51_030869 arginine ABC transporter [Ensembl]. ABC transporter... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 45 192
IPR000644 CBS_dom 347 393
No external refs found!