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  5. CCL16989

CCL16989 (BN171_1060003)


Aliases : BN171_1060003

Description : Two-component response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL16989
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.05 OrthoFinder
AAC76894 cpxR, b3912 response regulator in two-component regulatory system... 0.03 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AAK99332 spr0528, vncR VncR, response regulator [Ensembl]. Transcriptional... 0.03 OrthoFinder
AAK99511 spr0707, ciaR Response regulator, transcriptional regulatory protein... 0.03 OrthoFinder
AAK99910 spr1107, rr02 Response regulator [Ensembl]. Transcriptional regulatory... 0.02 OrthoFinder
AAL20028 STM1096, copR Copper resistance transcriptional regulatory protein... 0.03 OrthoFinder
AAL22051 STM3177, ygiX putative transcriptional regulator [Ensembl]. Response... 0.03 OrthoFinder
AEA93340 OG1RF_10653 response regulator [Ensembl]. Response regulator... 0.02 OrthoFinder
AGT22533 N559_0740, QseB DNA-binding transcriptional regulator QseB [Ensembl].... 0.02 OrthoFinder
AHY40464 CJ8421_06285 two-component regulator [Ensembl]. Transcriptional... 0.02 OrthoFinder
AKI48258 L2625_00311 DNA-binding response regulator [Ensembl]. OmpR/PhoB-type... 0.03 OrthoFinder
AKI49374 lisR, L2625_01474 two component response regulator [Ensembl].... 0.03 OrthoFinder
AKI50514 L2625_02705 DNA-binding response regulator [Ensembl]. Signal... 0.03 OrthoFinder
CCG26924 No alias Two-component system response regulator [Ensembl].... 0.07 OrthoFinder
CCL19656 BN171_3350005 Two-component response regulator [Ensembl]. Response... 0.06 OrthoFinder
CCL19825 BN171_3520011 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL20055 BN171_3670038 Two-component response regulator, CheY family [Ensembl].... 0.08 OrthoFinder
CCP43651 prrA, Rv0903c Two component response transcriptional regulatory... 0.02 OrthoFinder
CCP43777 kdpE, Rv1027c Probable transcriptional regulatory protein KdpE... 0.03 OrthoFinder
CCP43784 trcR, Rv1033c Two component transcriptional regulator TrcR [Ensembl].... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.04 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.04 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.05 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRP32671 czcR_3 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.03 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.04 OrthoFinder
EDJ90537 CGSHi22421_03168 phosphate regulon transcriptional regulatory protein... 0.02 OrthoFinder
KNA54887 VCV51_031804 response regulator receiver domain-containing protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 4 112
IPR001867 OmpR/PhoB-type_DNA-bd 150 226
UniProtKB U3WTF4