AGT23023 (N559_1259)

Aliases : N559_1259

Description : hypothetical protein [Ensembl]. transmembrane domain MetI-like [InterProScan].

Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT23023
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AAC73310	metN, b0199	DL-methionine transporter subunit [Ensembl]. NIL domain,...	0.03	OrthoFinder
AAC73753	gltL, b0652	glutamate/aspartate ABC transporter ATPase [Ensembl]....	0.04	OrthoFinder
AAC73951	artP, b0864	arginine ABC transporter ATPase [Ensembl]. ABC...	0.03	OrthoFinder
AAC74984	tcyN, b1917	putative ABC transporter ATPase [Ensembl]. ABC...	0.04	OrthoFinder
AAC75366	hisP, b2306	histidine ABC transporter ATPase [Ensembl]. ABC...	0.05	OrthoFinder
AAK98953	spr0149, ABC-NBD	ABC transporter ATP-binding protein-unknown substrate...	0.03	OrthoFinder
AAK99426	spr0622, glnQ	ABC transporter ATP-binding protein-glutamine transport...	0.03	OrthoFinder
AAL00158	spr1354, glnQ	ABC transporter ATP-binding protein-glutamine transport...	0.03	OrthoFinder
AAL21252	STM2351, hisP	histidine and lysine/arginine/ornithine transport...	0.04	OrthoFinder
AGT23905	N559_2193	putative ABC transporter [Ensembl].	0.04	OrthoFinder
AGT24090	N559_2393	putative ATP-binding component of a transport system [Ensembl].	0.06	OrthoFinder
AGT24332	N559_2656	D-and L-methionine ABC transporter ATP-binding protein [Ensembl].	0.1	OrthoFinder
AGT24560	N559_2893	ABC transporter, ATP-binding protein [Ensembl]. NIL...	0.06	OrthoFinder
AGT25742	N559_4116	glutamate/aspartate transport system ATP-binding...	0.06	OrthoFinder
CCG26203	No alias	RTX toxin transporter, ATP-binding protein [Ensembl]....	0.02	OrthoFinder
CPD19941	tcyC, ERS093114_02273	amino acid ABC transporter%2C ATP-binding protein...	0.04	OrthoFinder
CPD33665	metN_2, ERS093114_02598	ABC transporter ATP-binding protein [Ensembl]. NIL...	0.04	OrthoFinder
CRN71228	hisP_1	Histidine transport ATP-binding protein HisP [Ensembl]....	0.03	OrthoFinder
CRO45104	metN_1	Methionine import ATP-binding protein MetN [Ensembl]....	0.07	OrthoFinder
CRO59431	glnQ_2	Glutamine transport ATP-binding protein GlnQ [Ensembl]....	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
MF	GO:0008671	2-dehydro-3-deoxygalactonokinase activity	IEP	Enrichment
MF	GO:0008733	L-arabinose isomerase activity	IEP	Enrichment
BP	GO:0009056	catabolic process	IEP	Enrichment
BP	GO:0015716	organic phosphonate transport	IEP	Enrichment
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Enrichment
MF	GO:0016833	oxo-acid-lyase activity	IEP	Enrichment
MF	GO:0019200	carbohydrate kinase activity	IEP	Enrichment
BP	GO:0019520	aldonic acid metabolic process	IEP	Enrichment
BP	GO:0019583	galactonate metabolic process	IEP	Enrichment
BP	GO:0019584	galactonate catabolic process	IEP	Enrichment
BP	GO:0019634	organic phosphonate metabolic process	IEP	Enrichment
BP	GO:0019637	organophosphate metabolic process	IEP	Enrichment
BP	GO:0019700	organic phosphonate catabolic process	IEP	Enrichment
CC	GO:0030288	outer membrane-bounded periplasmic space	IEP	Enrichment
BP	GO:0034192	D-galactonate metabolic process	IEP	Enrichment
BP	GO:0034194	D-galactonate catabolic process	IEP	Enrichment
CC	GO:0042597	periplasmic space	IEP	Enrichment
BP	GO:0044248	cellular catabolic process	IEP	Enrichment
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Enrichment
BP	GO:0045229	external encapsulating structure organization	IEP	Enrichment
BP	GO:0046176	aldonic acid catabolic process	IEP	Enrichment
BP	GO:0071554	cell wall organization or biogenesis	IEP	Enrichment
BP	GO:0071555	cell wall organization	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000515	MetI-like	35	220
IPR003439	ABC_transporter-like_ATP-bd	276	429

External Links

No external refs found!

AGT23023 (N559_1259)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation