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  5. AGT23422

AGT23422 (N559_1678)


Aliases : N559_1678

Description : PTS system beta-glucoside-specific transporter subunits IIABC [Ensembl]. cysteine phosphorylation site [InterProScan].


Gene families : OG_02_0000086 (OrthoFinder) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23422
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAK99309 spr0505, PTS-EII Phosphotransferase system sugar-specific EII component... 0.03 OrthoFinder
AAT48150 ascF, b2715 cellobiose/arbutin/salicin-specific PTS enzymes, IIB and... 0.03 OrthoFinder
AGT22951 N559_1184 PTS system cellobiose/arbutin/salicin-specific... 0.08 OrthoFinder
AKI48003 L2625_00027 PTS system, beta-glucoside-specific, IIABC component... 0.04 OrthoFinder
AKI48691 L2625_00760 phosphotransferase system (PTS) beta-glucoside-specific... 0.03 OrthoFinder
CCG26227 No alias PTS system, beta-glucoside-specific IIB component / PTS... 0.06 OrthoFinder
CCL19010 bglF, BN171_280025 PTS system, beta-glucoside-specific IIABC component... 0.05 OrthoFinder
CCL19561 bglF, BN171_3260012 PTS system, beta-glucoside-specific IIABC component... 0.04 OrthoFinder
EDJ90307 CGSHi22421_02226 glucose-specific PTS system enzyme IIA component... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0015926 glucosidase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034219 carbohydrate transmembrane transport IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001127 PTS_EIIA_1_perm 473 598
IPR003352 PTS_EIIC 109 393
IPR018113 PTrfase_EIIB_Cys 8 41
No external refs found!