AGT23466 (N559_1724)

Aliases : N559_1724

Description : putative dipeptide ABC transport system ATP-binding component [Ensembl].

Gene families : OG_02_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT23466
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AAC74329	oppF, b1247	oligopeptide ABC transporter ATPase [Ensembl]. ABC...	0.11	OrthoFinder
AAC74372	sapF, b1290	antimicrobial peptide ABC transporter ATPase [Ensembl]....	0.2	OrthoFinder
AAC74373	sapD, b1291	antimicrobial peptide ABC transporter ATPase [Ensembl]....	0.3	OrthoFinder
AAC74557	ddpD, b1484	D,D-dipeptide ABC transporter ATPase [Ensembl]. ABC...	0.17	OrthoFinder
AAC76504	nikD, b3479	nickel ABC transporter ATPase [Ensembl]. ABC transporter...	0.04	OrthoFinder
AAC76505	nikE, b3480	nickel ABC transporter ATPase [Ensembl]. ABC transporter...	0.06	OrthoFinder
AAC76565	dppF, b3540	dipeptide/heme ABC transporter ATPas [Ensembl]. ABC...	0.11	OrthoFinder
AAC76566	dppD, b3541	dipeptide/heme ABC transporter ATPas [Ensembl]. ABC...	0.12	OrthoFinder
AAK99994	spr1191, appD	ABC transporter ATP-binding protein-oligopeptide...	0.02	OrthoFinder
AAL00507	spr1704, amiE	ABC transporter ATP-binding protein-oligopeptide...	0.03	OrthoFinder
AAL20612	STM1695, sapD	ABC superfamily peptide transport protein [Ensembl]. ABC...	0.03	OrthoFinder
AAL20660	STM1742, oppF	oligopeptide transport protein [Ensembl]. ABC...	0.04	OrthoFinder
AAL20661	STM1743, oppD	oligopeptide transport protein [Ensembl]. ABC...	0.04	OrthoFinder
AAL22487	STM3626, dppF	dipeptide transport protein [Ensembl]. ABC transporter,...	0.03	OrthoFinder
AAL22488	STM3627, dppD	dipeptide transport protein [Ensembl]. ABC transporter,...	0.03	OrthoFinder
AAT48129	oppD, b1246	oligopeptide ABC transporter ATPase [Ensembl]. ABC...	0.11	OrthoFinder
AEA93325	opp1D, OG1RF_10638	ABC superfamily ATP binding cassette transporter, ABC...	0.03	OrthoFinder
AEA93326	opp1F, OG1RF_10639	ABC superfamily ATP binding cassette transporter, ABC...	0.04	OrthoFinder
AEA95056	opp2F, OG1RF_12369	ABC superfamily ATP binding cassette transporter, ABC...	0.1	OrthoFinder
AEA95057	opp2D, OG1RF_12370	ABC superfamily ATP binding cassette transporter, ABC...	0.08	OrthoFinder
AGT22076	N559_0254	dipeptide transporter ATP-binding subunit [Ensembl].	0.06	OrthoFinder
AGT22077	N559_0255	dipeptide transporter ATP-binding subunit [Ensembl].	0.09	OrthoFinder
AGT23805	N559_2087	oligopeptide transporter ATP-binding component [Ensembl].	0.04	OrthoFinder
AGT23806	N559_2088	ATP-binding protein of oligopeptide ABC transport system...	0.03	OrthoFinder
AGT23968	N559_2265	ATP-binding protein of oligopeptide ABC transport system...	0.07	OrthoFinder
AGT23969	N559_2266	putative ABC transport system ATP-binding protein [Ensembl].	0.07	OrthoFinder
AGT24126	N559_2433	putative ATP-binding component of a transport system [Ensembl].	0.05	OrthoFinder
AGT26723	N559_5149, PhnK	putative phosphonate C-P lyase system protein PhnK [Ensembl].	0.02	OrthoFinder
AKI50190	oppF, L2625_02356	oligopeptide ABC transporter, ATP-binding protein...	0.03	OrthoFinder
AKI50191	oppD, L2625_02357	oligopeptide ABC transporter, ATP-binding protein...	0.02	OrthoFinder
CBI66817	dppF, HPB8_1260	dipeptide ABC transporter, ATP-binding protein (DppF)...	0.13	OrthoFinder
CBI66818	dppD, HPB8_1261	dipeptide ABC transporter, ATP-binding protein (DppD)...	0.07	OrthoFinder
CCG26343	OppD	Oligopeptide transport ATP-binding protein OppD (TC...	0.03	OrthoFinder
CCG26344	OppF	Oligopeptide transport ATP-binding protein OppF (TC...	0.03	OrthoFinder
CCL19133	BN171_2870063	ABC-type transport system, ATP-binding protein; putative...	0.04	OrthoFinder
CPC32253	gsiA, ERS093114_00037	nickel transport ATP-binding protein [Ensembl]. ABC...	0.04	OrthoFinder
CPC43686	oppF_1, ERS093114_00436	Oligopeptide transport ATP-binding protein oppF...	0.03	OrthoFinder
CPC43717	oppD_1, ERS093114_00437	Oligopeptide transport ATP-binding protein oppD...	0.03	OrthoFinder
CPC43817	oppF_2, ERS093114_00440	Oligopeptide transport ATP-binding protein oppF...	0.04	OrthoFinder
CPC43856	oppD_2, ERS093114_00441	Oligopeptide transport ATP-binding protein oppD...	0.06	OrthoFinder
CPC72162	metN2_2, ERS093114_01160	ABC transporter ATP-binding protein [Ensembl]. ABC...	0.07	OrthoFinder
CPC72201	lolD_2, ERS093114_01161	ABC transporter ATP-binding protein [Ensembl]. ABC...	0.07	OrthoFinder
CPD18123	opp-1D, ERS093114_02219	Oligopeptide transporter putative ATPase domain protein...	0.07	OrthoFinder
CPD18163	cysA, ERS093114_02220	nickel transport ATP-binding protein [Ensembl]. ABC...	0.06	OrthoFinder
CRO32851	gsiA_2	Glutathione import ATP-binding protein GsiA [Ensembl]....	0.03	OrthoFinder
CRO37964	gsiA_3	Glutathione import ATP-binding protein GsiA [Ensembl]....	0.03	OrthoFinder
CRP12213	oppD	Stage 0 sporulation protein KD [Ensembl]. ABC...	0.21	OrthoFinder
CRP12239	gsiA_4	Glutathione import ATP-binding protein GsiA [Ensembl]....	0.13	OrthoFinder
EDJ90880	CGSHi22421_03488	peptide ABC transporter ATP-binding protein [Ensembl]....	0.05	OrthoFinder
EDJ90881	CGSHi22421_03493	peptide ABC transporter ATP-binding protein [Ensembl]....	0.03	OrthoFinder
EDJ91923	CGSHi22421_09208	GTPase EngB [Ensembl]. ABC transporter,...	0.04	OrthoFinder
EDJ91924	CGSHi22421_09213	oligopeptide transporter ATP-binding component...	0.02	OrthoFinder
KNA51869	VCV51_030399	peptide ABC transporter ATP-binding protein [Ensembl]....	0.08	OrthoFinder
KNA51870	VCV51_030400	peptide ABC transporter ATP-binding protein [Ensembl]....	0.09	OrthoFinder
KNA52457	VCV51_030121	peptide ABC transporter ATP-binding protein [Ensembl]....	0.03	OrthoFinder
KNA54680	VCV51_030766	oligopeptide ABC transporter ATP-binding protein...	0.02	OrthoFinder
KNA54681	VCV51_030767	oligopeptide ABC transporter ATP-binding protein...	0.03	OrthoFinder
KNA58583	VCV51_031124	peptide ABC transporter ATP-binding protein [Ensembl]....	0.03	OrthoFinder
KNA58584	VCV51_031123	peptide ABC transporter ATP-binding protein [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009297	pilus assembly	IEP	Enrichment
MF	GO:0015288	porin activity	IEP	Enrichment
MF	GO:0015473	fimbrial usher porin activity	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0022829	wide pore channel activity	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
BP	GO:0043711	pilus organization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	39	194

External Links

No external refs found!

AGT23466 (N559_1724)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation