AGT23466 (N559_1724)


Aliases : N559_1724

Description : putative dipeptide ABC transport system ATP-binding component [Ensembl].


Gene families : OG_02_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23466
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC74329 oppF, b1247 oligopeptide ABC transporter ATPase [Ensembl]. ABC... 0.11 OrthoFinder
AAC74372 sapF, b1290 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.2 OrthoFinder
AAC74373 sapD, b1291 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.3 OrthoFinder
AAC74557 ddpD, b1484 D,D-dipeptide ABC transporter ATPase [Ensembl]. ABC... 0.17 OrthoFinder
AAC76504 nikD, b3479 nickel ABC transporter ATPase [Ensembl]. ABC transporter... 0.04 OrthoFinder
AAC76505 nikE, b3480 nickel ABC transporter ATPase [Ensembl]. ABC transporter... 0.06 OrthoFinder
AAC76565 dppF, b3540 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.11 OrthoFinder
AAC76566 dppD, b3541 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.12 OrthoFinder
AAK99994 spr1191, appD ABC transporter ATP-binding protein-oligopeptide... 0.02 OrthoFinder
AAL00507 spr1704, amiE ABC transporter ATP-binding protein-oligopeptide... 0.03 OrthoFinder
AAL20612 STM1695, sapD ABC superfamily peptide transport protein [Ensembl]. ABC... 0.03 OrthoFinder
AAL20660 STM1742, oppF oligopeptide transport protein [Ensembl]. ABC... 0.04 OrthoFinder
AAL20661 STM1743, oppD oligopeptide transport protein [Ensembl]. ABC... 0.04 OrthoFinder
AAL22487 STM3626, dppF dipeptide transport protein [Ensembl]. ABC transporter,... 0.03 OrthoFinder
AAL22488 STM3627, dppD dipeptide transport protein [Ensembl]. ABC transporter,... 0.03 OrthoFinder
AAT48129 oppD, b1246 oligopeptide ABC transporter ATPase [Ensembl]. ABC... 0.11 OrthoFinder
AEA93325 opp1D, OG1RF_10638 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA93326 opp1F, OG1RF_10639 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AEA95056 opp2F, OG1RF_12369 ABC superfamily ATP binding cassette transporter, ABC... 0.1 OrthoFinder
AEA95057 opp2D, OG1RF_12370 ABC superfamily ATP binding cassette transporter, ABC... 0.08 OrthoFinder
AGT22076 N559_0254 dipeptide transporter ATP-binding subunit [Ensembl]. 0.06 OrthoFinder
AGT22077 N559_0255 dipeptide transporter ATP-binding subunit [Ensembl]. 0.09 OrthoFinder
AGT23805 N559_2087 oligopeptide transporter ATP-binding component [Ensembl]. 0.04 OrthoFinder
AGT23806 N559_2088 ATP-binding protein of oligopeptide ABC transport system... 0.03 OrthoFinder
AGT23968 N559_2265 ATP-binding protein of oligopeptide ABC transport system... 0.07 OrthoFinder
AGT23969 N559_2266 putative ABC transport system ATP-binding protein [Ensembl]. 0.07 OrthoFinder
AGT24126 N559_2433 putative ATP-binding component of a transport system [Ensembl]. 0.05 OrthoFinder
AGT26723 N559_5149, PhnK putative phosphonate C-P lyase system protein PhnK [Ensembl]. 0.02 OrthoFinder
AKI50190 oppF, L2625_02356 oligopeptide ABC transporter, ATP-binding protein... 0.03 OrthoFinder
AKI50191 oppD, L2625_02357 oligopeptide ABC transporter, ATP-binding protein... 0.02 OrthoFinder
CBI66817 dppF, HPB8_1260 dipeptide ABC transporter, ATP-binding protein (DppF)... 0.13 OrthoFinder
CBI66818 dppD, HPB8_1261 dipeptide ABC transporter, ATP-binding protein (DppD)... 0.07 OrthoFinder
CCG26343 OppD Oligopeptide transport ATP-binding protein OppD (TC... 0.03 OrthoFinder
CCG26344 OppF Oligopeptide transport ATP-binding protein OppF (TC... 0.03 OrthoFinder
CCL19133 BN171_2870063 ABC-type transport system, ATP-binding protein; putative... 0.04 OrthoFinder
CPC32253 gsiA, ERS093114_00037 nickel transport ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
CPC43686 oppF_1, ERS093114_00436 Oligopeptide transport ATP-binding protein oppF... 0.03 OrthoFinder
CPC43717 oppD_1, ERS093114_00437 Oligopeptide transport ATP-binding protein oppD... 0.03 OrthoFinder
CPC43817 oppF_2, ERS093114_00440 Oligopeptide transport ATP-binding protein oppF... 0.04 OrthoFinder
CPC43856 oppD_2, ERS093114_00441 Oligopeptide transport ATP-binding protein oppD... 0.06 OrthoFinder
CPC72162 metN2_2, ERS093114_01160 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.07 OrthoFinder
CPC72201 lolD_2, ERS093114_01161 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.07 OrthoFinder
CPD18123 opp-1D, ERS093114_02219 Oligopeptide transporter putative ATPase domain protein... 0.07 OrthoFinder
CPD18163 cysA, ERS093114_02220 nickel transport ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
CRO32851 gsiA_2 Glutathione import ATP-binding protein GsiA [Ensembl].... 0.03 OrthoFinder
CRO37964 gsiA_3 Glutathione import ATP-binding protein GsiA [Ensembl].... 0.03 OrthoFinder
CRP12213 oppD Stage 0 sporulation protein KD [Ensembl]. ABC... 0.21 OrthoFinder
CRP12239 gsiA_4 Glutathione import ATP-binding protein GsiA [Ensembl].... 0.13 OrthoFinder
EDJ90880 CGSHi22421_03488 peptide ABC transporter ATP-binding protein [Ensembl].... 0.05 OrthoFinder
EDJ90881 CGSHi22421_03493 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
EDJ91923 CGSHi22421_09208 GTPase EngB [Ensembl]. ABC transporter,... 0.04 OrthoFinder
EDJ91924 CGSHi22421_09213 oligopeptide transporter ATP-binding component... 0.02 OrthoFinder
KNA51869 VCV51_030399 peptide ABC transporter ATP-binding protein [Ensembl].... 0.08 OrthoFinder
KNA51870 VCV51_030400 peptide ABC transporter ATP-binding protein [Ensembl].... 0.09 OrthoFinder
KNA52457 VCV51_030121 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
KNA54680 VCV51_030766 oligopeptide ABC transporter ATP-binding protein... 0.02 OrthoFinder
KNA54681 VCV51_030767 oligopeptide ABC transporter ATP-binding protein... 0.03 OrthoFinder
KNA58583 VCV51_031124 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
KNA58584 VCV51_031123 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 39 194
No external refs found!