AGT23469 (N559_1728, BaeR)

Aliases : N559_1728, BaeR

Description : DNA-binding transcriptional regulator BaeR [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT23469
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AAC76894	cpxR, b3912	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAK99140	spr0336, csrR	Response regulator [Ensembl]. Transcriptional regulatory...	0.02	OrthoFinder
AAK99511	spr0707, ciaR	Response regulator, transcriptional regulatory protein...	0.03	OrthoFinder
AAL00695	spr1893, phoP	Response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder
AAL21035	STM2131, baeR	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAL23116	STM4292, basR	response regulator in two-component regulatory system...	0.03	OrthoFinder
AEA92946	OG1RF_10259	response regulator [Ensembl]. Response regulator...	0.03	OrthoFinder
AEA93340	OG1RF_10653	response regulator [Ensembl]. Response regulator...	0.03	OrthoFinder
AHY40427	CJ8421_06100	two-component regulator [Ensembl]. Transcriptional...	0.02	OrthoFinder
AKI49374	lisR, L2625_01474	two component response regulator [Ensembl]....	0.03	OrthoFinder
AKI49943	resD, L2625_02095	DNA-binding response regulator [Ensembl]. OmpR/PhoB-type...	0.04	OrthoFinder
CCL18961	BN171_2770012	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CRO26486	cheY_1	Chemotaxis protein CheY [Ensembl]. Response regulator...	0.04	OrthoFinder
CRO38230	rstA	Transcriptional regulatory protein RstA [Ensembl]....	0.03	OrthoFinder
CRP07594	czcR_2	Transcriptional activator protein CzcR [Ensembl]....	0.02	OrthoFinder
CRP51890	walR_2	Transcriptional regulatory protein WalR [Ensembl]....	0.03	OrthoFinder
KNA58243	VCV51_032751	response regulator receiver domain-containing protein...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Enrichment
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	IEP	Enrichment
BP	GO:0019627	urea metabolic process	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
BP	GO:0071941	nitrogen cycle metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	13	121
IPR001867	OmpR/PhoB-type_DNA-bd	159	231

External Links

No external refs found!

AGT23469 (N559_1728, BaeR)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation