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AGT23473 (N559_1732, MdtB)


Aliases : N559_1732, MdtB

Description : multidrug efflux system subunit MdtB [Ensembl]. AcrB/AcrD/AcrF family [InterProScan].


Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23473
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AAC73564 acrB, b0462 multidrug efflux system protein [Ensembl].... 0.05 OrthoFinder
AAC76539 mdtF, b3514 anaerobic multidrug efflux transporter, ArcA-regulated... 0.05 OrthoFinder
AHY40240 CJ8421_05130 RND pump protein [Ensembl]. AcrB/AcrD/AcrF family [Interproscan]. 0.03 OrthoFinder
AKP14428 mexB, WX61_00346 Multidrug resistance protein MexB [Ensembl].... 0.03 OrthoFinder
CCL18817 BN171_2660006 Putative multidrug efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.03 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.03 OrthoFinder
CRP58341 mdtB_2 Multidrug transporter MdtB [Ensembl]. AcrB/AcrD/AcrF... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 13 1022
No external refs found!