AGT23577 (N559_1844, YecC)

Aliases : N559_1844, YecC

Description : putative amino-acid ABC transporter ATP-binding protein YecC [Ensembl].

Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT23577
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73310 metN, b0199 DL-methionine transporter subunit [Ensembl]. NIL domain,... 0.1 OrthoFinder
AAC73753 gltL, b0652 glutamate/aspartate ABC transporter ATPase [Ensembl].... 0.07 OrthoFinder
AAC73951 artP, b0864 arginine ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.16 OrthoFinder
AAC75366 hisP, b2306 histidine ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAK99426 spr0622, glnQ ABC transporter ATP-binding protein-glutamine transport... 0.02 OrthoFinder
AAL00118 spr1314, ABC-NDB ABC transporter ATP-binding protein-aspartate/glutamate... 0.03 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.13 OrthoFinder
AAL20863 STM1951, yecC putative ABC-type polar amino acid transport system... 0.03 OrthoFinder
AAL21252 STM2351, hisP histidine and lysine/arginine/ornithine transport... 0.06 OrthoFinder
AGT24090 N559_2393 putative ATP-binding component of a transport system [Ensembl]. 0.03 OrthoFinder
AGT25146 N559_3495 glutamine ABC transporter ATP-binding protein [Ensembl]. 0.05 OrthoFinder
AKI48962 gbuA, L2625_01044 glycine betaine/L-proline ABC transporter, ATP-binding... 0.03 OrthoFinder
AKI50280 hisP, L2625_02448 polar amino acid ABC transporter, ATP-binding protein... 0.03 OrthoFinder
CBI67198 metN, HPB8_1641 D-methionine transport system ATP-binding protein... 0.03 OrthoFinder
CCG27183 No alias ABC-type multidrug transport system, ATPase component... 0.03 OrthoFinder
CCL18018 BN171_2030004 ABC-type transport system, aminoacid-family ATP-binding... 0.03 OrthoFinder
CCL18560 BN171_2440001 ABC-type transport system,cystine/aminoacid-family... 0.05 OrthoFinder
CPD30941 glnQ, ERS093114_02522 Glutamine transport ATP-binding protein glnQ [Ensembl].... 0.02 OrthoFinder
CPD33665 metN_2, ERS093114_02598 ABC transporter ATP-binding protein [Ensembl]. NIL... 0.03 OrthoFinder
CRO39434 glnQ_1 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.04 OrthoFinder
CRO48464 hisP_2 Histidine transport ATP-binding protein HisP [Ensembl].... 0.03 OrthoFinder
CRO59431 glnQ_2 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.04 OrthoFinder
KNA53743 VCV51_033269 amino acid ABC transporter [Ensembl]. ABC transporter... 0.08 OrthoFinder
KNA56297 VCV51_030617 D-methionine ABC transporter [Ensembl]. NIL domain, ABC... 0.06 OrthoFinder
KNA58915 VCV51_031260 amino acid ABC transporter [Ensembl]. ABC transporter... 0.03 OrthoFinder
KNA59809 VCV51_030869 arginine ABC transporter [Ensembl]. ABC transporter... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 19 173
No external refs found!