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  5. AGT23803

AGT23803 (N559_2085)


Aliases : N559_2085

Description : oligopeptide transporter permease [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23803
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.03 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.05 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.02 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.02 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.02 OrthoFinder
CPC32208 nikB, ERS093114_00035 nickel transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.02 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.04 OrthoFinder
EDJ90883 CGSHi22421_03503 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.06 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA54678 VCV51_030764 binding-protein-dependent transport system inner... 0.07 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006527 arginine catabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008791 arginine N-succinyltransferase activity IEP Enrichment
MF GO:0009015 N-succinylarginine dihydrolase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0016748 succinyltransferase activity IEP Enrichment
MF GO:0016749 N-succinyltransferase activity IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 112 306
No external refs found!