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  5. AGT24018

AGT24018 (N559_2317)


Aliases : N559_2317

Description : endonuclease III [Ensembl]. Iron-sulfur binding domain of endonuclease III, HhH-GPD domain [InterProScan].


Gene families : OG_02_0000527 (OrthoFinder) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24018
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AAC74705 nth, b1633 DNA glycosylase and apyrimidinic (AP) lyase... 0.11 OrthoFinder
AAL20375 STM1453, nth endonuclease III [Ensembl]. Helix-hairpin-helix motif,... 0.03 OrthoFinder
CRO09190 nth Endonuclease III [Ensembl]. Helix-hairpin-helix motif,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006284 base-excision repair IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008556 P-type potassium transmembrane transporter activity IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015662 P-type ion transporter activity IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140358 P-type transmembrane transporter activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003265 HhH-GPD_domain 34 168
IPR000445 HhH_motif 100 127
IPR003651 Endonuclease3_FeS-loop_motif 187 203
No external refs found!