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  5. AGT24061

AGT24061 (N559_2362)


Aliases : N559_2362

Description : ABC transporter, ATP-binding protein [Ensembl]. TOBE domain [InterProScan].


Gene families : OG_02_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24061
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC74523 ydcT, b1441 putative ABC transporter ATPase [Ensembl]. TOBE domain,... 0.19 OrthoFinder
AAC76475 ugpC, b3450 sn-glycerol-3-phosphate ABC transporter ATPase... 0.11 OrthoFinder
AAL20410 STM1491 ABC-type proline/glycine betaine transport system... 0.16 OrthoFinder
AAL21067 STM2163, yehX putative ABC-type proline/glycine betaine transport... 0.04 OrthoFinder
AAL22414 STM3554, ugpC sn-glycerol 3-phosphate transport protein [Ensembl]. ABC... 0.02 OrthoFinder
CCG26977 No alias Multiple sugar ABC transporter, ATP-binding protein... 0.03 OrthoFinder
CPD18723 proV_2, ERS093114_02234 glycine betaine transport ATP-binding protein [Ensembl].... 0.01 OrthoFinder
CRO00959 opuCA Glycine betaine/carnitine/choline transport ATP-binding... 0.1 OrthoFinder
CRP18414 ugpC sn-glycerol-3-phosphate import ATP-binding protein UgpC... 0.03 OrthoFinder
CRP37598 ssuB_1 Aliphatic sulfonates import ATP-binding protein SsuB... 0.03 OrthoFinder
KNA60932 VCV51_031906 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0050498 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 21 162
IPR013611 Transp-assoc_OB_typ2 257 330
No external refs found!