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  5. AGT24090

AGT24090 (N559_2393)


Aliases : N559_2393

Description : putative ATP-binding component of a transport system [Ensembl].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24090
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC73753 gltL, b0652 glutamate/aspartate ABC transporter ATPase [Ensembl].... 0.06 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAC75366 hisP, b2306 histidine ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAK99339 spr0535 ABC transporter ATP-binding protein-glutamine,... 0.03 OrthoFinder
AAK99340 spr0536 ABC transporter ATP-binding protein-glutamine,... 0.04 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.03 OrthoFinder
AAL20553 STM1635 putative ABC-type polar amino acid transport system... 0.05 OrthoFinder
AAL21252 STM2351, hisP histidine and lysine/arginine/ornithine transport... 0.03 OrthoFinder
AEA92870 OG1RF_10183 ABC superfamily ATP binding cassette transporter, ABC... 0.02 OrthoFinder
AEA93225 OG1RF_10538 ABC superfamily ATP binding cassette transporter, ABC... 0.06 OrthoFinder
AEA93585 OG1RF_10898 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AEA94371 OG1RF_11684 ABC superfamily ATP binding cassette transporter,... 0.02 OrthoFinder
AGT22989 N559_1225 ATP-binding component of transport system for glycine,... 0.04 OrthoFinder
AGT23023 N559_1259 hypothetical protein [Ensembl]. transmembrane domain... 0.06 OrthoFinder
AGT23308 N559_1556 histidine/lysine/arginine/ornithine transporter subunit... 0.02 OrthoFinder
AGT23577 N559_1844, YecC putative amino-acid ABC transporter ATP-binding protein... 0.03 OrthoFinder
AGT23905 N559_2193 putative ABC transporter [Ensembl]. 0.04 OrthoFinder
AGT24221 N559_2539 ATP-binding component of histidine transport [Ensembl]. 0.03 OrthoFinder
AGT25146 N559_3495 glutamine ABC transporter ATP-binding protein [Ensembl]. 0.06 OrthoFinder
AGT25388 N559_3752 putative ABC transporter [Ensembl]. 0.05 OrthoFinder
AGT25742 N559_4116 glutamate/aspartate transport system ATP-binding... 0.07 OrthoFinder
AKI49733 L2625_01874 amino acid ABC transporter, ATP-binding protein... 0.03 OrthoFinder
AKI50280 hisP, L2625_02448 polar amino acid ABC transporter, ATP-binding protein... 0.02 OrthoFinder
CCL18560 BN171_2440001 ABC-type transport system,cystine/aminoacid-family... 0.04 OrthoFinder
CPD19941 tcyC, ERS093114_02273 amino acid ABC transporter%2C ATP-binding protein... 0.06 OrthoFinder
CPD30941 glnQ, ERS093114_02522 Glutamine transport ATP-binding protein glnQ [Ensembl].... 0.06 OrthoFinder
CPD33665 metN_2, ERS093114_02598 ABC transporter ATP-binding protein [Ensembl]. NIL... 0.05 OrthoFinder
CRO45104 metN_1 Methionine import ATP-binding protein MetN [Ensembl].... 0.13 OrthoFinder
CRO48464 hisP_2 Histidine transport ATP-binding protein HisP [Ensembl].... 0.03 OrthoFinder
CRO59431 glnQ_2 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.17 OrthoFinder
EDJ90253 CGSHi22421_06419 probable D-methionine transport ATP-binding protein... 0.02 OrthoFinder
EDJ91873 CGSHi22421_08958 probable amino-acid ABC transporter ATP-binding protein... 0.03 OrthoFinder
KNA53743 VCV51_033269 amino acid ABC transporter [Ensembl]. ABC transporter... 0.02 OrthoFinder
KNA59809 VCV51_030869 arginine ABC transporter [Ensembl]. ABC transporter... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 14 172
No external refs found!