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  5. AGT24126

AGT24126 (N559_2433)


Aliases : N559_2433

Description : putative ATP-binding component of a transport system [Ensembl].


Gene families : OG_02_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24126
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC74329 oppF, b1247 oligopeptide ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAC74372 sapF, b1290 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.05 OrthoFinder
AAC74373 sapD, b1291 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.06 OrthoFinder
AAC74557 ddpD, b1484 D,D-dipeptide ABC transporter ATPase [Ensembl]. ABC... 0.06 OrthoFinder
AAC76565 dppF, b3540 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.08 OrthoFinder
AAC76566 dppD, b3541 dipeptide/heme ABC transporter ATPas [Ensembl]. ABC... 0.08 OrthoFinder
AAL00507 spr1704, amiE ABC transporter ATP-binding protein-oligopeptide... 0.03 OrthoFinder
AAL20660 STM1742, oppF oligopeptide transport protein [Ensembl]. ABC... 0.03 OrthoFinder
AAL20661 STM1743, oppD oligopeptide transport protein [Ensembl]. ABC... 0.03 OrthoFinder
AAL22487 STM3626, dppF dipeptide transport protein [Ensembl]. ABC transporter,... 0.04 OrthoFinder
AAL22488 STM3627, dppD dipeptide transport protein [Ensembl]. ABC transporter,... 0.03 OrthoFinder
AAT48129 oppD, b1246 oligopeptide ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AEA93325 opp1D, OG1RF_10638 ABC superfamily ATP binding cassette transporter, ABC... 0.02 OrthoFinder
AEA93326 opp1F, OG1RF_10639 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AEA95056 opp2F, OG1RF_12369 ABC superfamily ATP binding cassette transporter, ABC... 0.08 OrthoFinder
AEA95057 opp2D, OG1RF_12370 ABC superfamily ATP binding cassette transporter, ABC... 0.09 OrthoFinder
AGT22076 N559_0254 dipeptide transporter ATP-binding subunit [Ensembl]. 0.05 OrthoFinder
AGT23466 N559_1724 putative dipeptide ABC transport system ATP-binding... 0.05 OrthoFinder
AKI50191 oppD, L2625_02357 oligopeptide ABC transporter, ATP-binding protein... 0.03 OrthoFinder
CBI66817 dppF, HPB8_1260 dipeptide ABC transporter, ATP-binding protein (DppF)... 0.05 OrthoFinder
CBI66818 dppD, HPB8_1261 dipeptide ABC transporter, ATP-binding protein (DppD)... 0.04 OrthoFinder
CCG26343 OppD Oligopeptide transport ATP-binding protein OppD (TC... 0.04 OrthoFinder
CCG26344 OppF Oligopeptide transport ATP-binding protein OppF (TC... 0.05 OrthoFinder
CCL19133 BN171_2870063 ABC-type transport system, ATP-binding protein; putative... 0.06 OrthoFinder
CPC32253 gsiA, ERS093114_00037 nickel transport ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
CPC43817 oppF_2, ERS093114_00440 Oligopeptide transport ATP-binding protein oppF... 0.07 OrthoFinder
CPC43856 oppD_2, ERS093114_00441 Oligopeptide transport ATP-binding protein oppD... 0.05 OrthoFinder
CPC72162 metN2_2, ERS093114_01160 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CPC72201 lolD_2, ERS093114_01161 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CPC95823 oppF_3, ERS093114_01726 Putative glutathione transporter%2C ATP-binding... 0.03 OrthoFinder
CPD18123 opp-1D, ERS093114_02219 Oligopeptide transporter putative ATPase domain protein... 0.03 OrthoFinder
CPD18163 cysA, ERS093114_02220 nickel transport ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CRP12213 oppD Stage 0 sporulation protein KD [Ensembl]. ABC... 0.05 OrthoFinder
CRP12239 gsiA_4 Glutathione import ATP-binding protein GsiA [Ensembl].... 0.04 OrthoFinder
EDJ90880 CGSHi22421_03488 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
EDJ90881 CGSHi22421_03493 peptide ABC transporter ATP-binding protein [Ensembl].... 0.02 OrthoFinder
EDJ91923 CGSHi22421_09208 GTPase EngB [Ensembl]. ABC transporter,... 0.03 OrthoFinder
KNA51869 VCV51_030399 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
KNA51870 VCV51_030400 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
KNA60920 VCV51_031894 peptide ABC transporter ATP-binding protein [Ensembl].... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0015833 peptide transport IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR013563 Oligopep_ABC_C 234 255
IPR013563 Oligopep_ABC_C 499 531
IPR003439 ABC_transporter-like_ATP-bd 296 448
IPR003439 ABC_transporter-like_ATP-bd 24 182
No external refs found!