AGT24140 (N559_2447)

Aliases : N559_2447

Description : LysR family transcriptional regulator [Ensembl]. LysR substrate binding domain, lysR family [InterProScan].

Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT24140
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AAC76546 rcdB, b3521 LysR family putative transcriptional regulator... 0.03 OrthoFinder
CRO36183 dmlR_11 D-malate degradation protein R [Ensembl]. LysR substrate... 0.03 OrthoFinder
CRO60046 dmlR_16 D-malate degradation protein R [Ensembl]. LysR substrate... 0.03 OrthoFinder
CRP22590 dmlR_24 D-malate degradation protein R [Ensembl]. LysR substrate... 0.02 OrthoFinder
KNA55708 VCV51_031016 LysR substrate binding domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 86 290
IPR000847 Tscrpt_reg_HTH_LysR 10 63
No external refs found!