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  5. AGT24163

AGT24163 (N559_2473)


Aliases : N559_2473

Description : lactose/cellobiose-specific PTS family enzyme IIB component [Ensembl].


Gene families : OG_02_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24163
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAK99034 spr0230, PTS-EIIB Phosphotransferase system sugar-specific EIIB component... 0.02 OrthoFinder
AAL00638 spr1835, ptcB Phosphotransferase system system, cellobiose-specific... 0.06 OrthoFinder
AEA93432 celA2, OG1RF_10745 PTS family porter, enzyme I [Ensembl]. PTS system [Interproscan]. 0.02 OrthoFinder
AGT21915 N559_0089 putative phosphotransferase system,... 0.06 OrthoFinder
AGT24714 N559_3051 PTS system N,N'-diacetylchitobiose-specific transporter... 0.03 OrthoFinder
AGT26513 N559_4929 PTS system lactose/cellobiose specific IIB subunit [Ensembl]. 0.03 OrthoFinder
AKI48270 L2625_00323 PTS system, IIB component [Ensembl]. Phosphotransferase... 0.04 OrthoFinder
AKI48335 L2625_00390 PTS system, beta-glucoside-specific, IIB component... 0.05 OrthoFinder
AKI50700 L2625_02916 PTS system, cellobiose-specific, IIB component... 0.05 OrthoFinder
AKI50719 L2625_02935 PTS system, beta-glucoside-specific, IIB component... 0.04 OrthoFinder
CCL19894 BN171_3590015 PTS system, lactose/cellobiose-family IIB component... 0.05 OrthoFinder
KNA56014 VCV51_030929 PTS system, cellobiose-specific IIB component [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003501 PTS_EIIB_2/3 3 94
No external refs found!