AGT24279 (N559_2603)

Aliases : N559_2603

Description : DeoR transcriptional regulator [Ensembl]. DeoR-like helix-turn-helix domain, DeoR C terminal sensor domain, DeoR-type HTH domain [InterProScan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT24279
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AAD13446	csqR, b3884	putative transcriptional regulator for sulphoquinovose...	0.07	OrthoFinder
AAK99871	spr1067, lacR	Lactose phosphotransferase system repressor [Ensembl]....	0.02	OrthoFinder
AEA93143	lacR, OG1RF_10456	lactose PTS family porter repressor [Ensembl]. DeoR C...	0.04	OrthoFinder
AKI50271	fruR, L2625_02439	transcriptional regulator, DeoR family [Ensembl]....	0.06	OrthoFinder
CCG26497	No alias	Transcriptional repressor of the fructose operon,DeoR...	0.04	OrthoFinder
CCG27005	No alias	Lactose phosphotransferase system repressor [Ensembl]....	0.03	OrthoFinder
CCG27227	No alias	Lactose phosphotransferase system repressor [Ensembl]....	0.04	OrthoFinder
CPC50829	glcR, ERS093114_00654	fructose repressor [Ensembl]. DeoR C terminal sensor...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0016854	racemase and epimerase activity	IEP	Enrichment
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001034	DeoR_HTH	6	59
IPR014036	DeoR_C	89	245

External Links

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AGT24279 (N559_2603)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation