AGT24279 (N559_2603)

Aliases : N559_2603

Description : DeoR transcriptional regulator [Ensembl]. DeoR-like helix-turn-helix domain, DeoR C terminal sensor domain, DeoR-type HTH domain [InterProScan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT24279
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAD13446 csqR, b3884 putative transcriptional regulator for sulphoquinovose... 0.07 OrthoFinder
AAK99871 spr1067, lacR Lactose phosphotransferase system repressor [Ensembl].... 0.02 OrthoFinder
AEA93143 lacR, OG1RF_10456 lactose PTS family porter repressor [Ensembl]. DeoR C... 0.04 OrthoFinder
AKI50271 fruR, L2625_02439 transcriptional regulator, DeoR family [Ensembl].... 0.06 OrthoFinder
CCG26497 No alias Transcriptional repressor of the fructose operon,DeoR... 0.04 OrthoFinder
CCG27005 No alias Lactose phosphotransferase system repressor [Ensembl].... 0.03 OrthoFinder
CCG27227 No alias Lactose phosphotransferase system repressor [Ensembl].... 0.04 OrthoFinder
CPC50829 glcR, ERS093114_00654 fructose repressor [Ensembl]. DeoR C terminal sensor... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR001034 DeoR_HTH 6 59
IPR014036 DeoR_C 89 245
No external refs found!