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  5. AGT24504

AGT24504 (N559_2833)


Aliases : N559_2833

Description : D-alanine/D-serine/glycine transport protein [Ensembl]. Amino acid permease/ SLC12A domain [InterProScan].


Gene families : OG_02_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24504
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC73223 aroP, b0112 aromatic amino acid transporter [Ensembl]. Amino acid... 0.04 OrthoFinder
AAC75217 lysP, b2156 lysine transporter [Ensembl]. Amino acid permease [Interproscan]. 0.06 OrthoFinder
AAC75710 gabP, b2663 gamma-aminobutyrate transporter [Ensembl]. Amino acid... 0.05 OrthoFinder
AAC77165 cycA, b4208 D-alanine/D-serine/glycine transporter [Ensembl]. Amino... 0.14 OrthoFinder
AAL19114 STM0150, aroP APC family aromatic amino acid transporter [Ensembl].... 0.04 OrthoFinder
AAL21678 STM2793, gabP RpoS dependent gamma-aminobutyrate transport protein... 0.07 OrthoFinder
AAL23218 STM4398, cycA APC family D-alanine/D-serine/glycine transport protein... 0.13 OrthoFinder
AGT23404 N559_1660 lysine transporter [Ensembl]. Amino acid permease/... 0.06 OrthoFinder
AGT25729 N559_4103 S-methylmethionine transporter [Ensembl]. Amino acid... 0.07 OrthoFinder
AGT25927 N559_4312 aromatic amino acid transporter [Ensembl]. Amino acid... 0.06 OrthoFinder
CPD10924 yifK, ERS093114_02057 Amino acid permease [Ensembl]. Amino acid permease... 0.07 OrthoFinder
CPD19103 cycA, ERS093114_02244 D-serine/D-alanine/glycine transporter [Ensembl]. Amino... 0.06 OrthoFinder
CRO55488 rocC Amino-acid permease RocC [Ensembl]. Amino acid permease... 0.03 OrthoFinder
CRP47581 proY_2 Proline-specific permease ProY [Ensembl]. Amino acid... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003994 aconitate hydratase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006527 arginine catabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008791 arginine N-succinyltransferase activity IEP Enrichment
MF GO:0009015 N-succinylarginine dihydrolase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015501 glutamate:sodium symporter activity IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
BP GO:0015800 acidic amino acid transport IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
BP GO:0015813 L-glutamate transmembrane transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016748 succinyltransferase activity IEP Enrichment
MF GO:0016749 N-succinyltransferase activity IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033735 aspartate dehydrogenase activity IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR004841 AA-permease/SLC12A_dom 28 459
No external refs found!