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  5. AGT24590

AGT24590 (N559_2925)


Aliases : N559_2925

Description : putative protease [Ensembl]. AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), D2-small domain, ATPase family associated with various cellular activities (AAA) [InterProScan].


Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24590
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
CRO45700 clpB_3 Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.06 OrthoFinder
CRO78663 clpB_4 Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.04 OrthoFinder
CRP27033 clpB_5 Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 360 450
IPR004176 Clp_R_dom 4 47
IPR003959 ATPase_AAA_core 220 332
IPR003959 ATPase_AAA_core 592 757
IPR019489 Clp_ATPase_C 766 837
No external refs found!