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AGT24650 (N559_2986)


Aliases : N559_2986

Description : peptide ABC transporter ATP-binding protein [Ensembl].


Gene families : OG_02_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24650
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC74372 sapF, b1290 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.02 OrthoFinder
AAC74373 sapD, b1291 antimicrobial peptide ABC transporter ATPase [Ensembl].... 0.01 OrthoFinder
AAC74557 ddpD, b1484 D,D-dipeptide ABC transporter ATPase [Ensembl]. ABC... 0.01 OrthoFinder
AAL20612 STM1695, sapD ABC superfamily peptide transport protein [Ensembl]. ABC... 0.03 OrthoFinder
AAL21122 STM2219, yejF putative ATPase component of ABC-type transport system... 0.03 OrthoFinder
AEA95057 opp2D, OG1RF_12370 ABC superfamily ATP binding cassette transporter, ABC... 0.02 OrthoFinder
AGT23969 N559_2266 putative ABC transport system ATP-binding protein [Ensembl]. 0.02 OrthoFinder
EDJ90653 CGSHi22421_04068 DNA ligase [Ensembl]. ABC transporter,... 0.03 OrthoFinder
EDJ90881 CGSHi22421_03493 peptide ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
KNA58583 VCV51_031124 peptide ABC transporter ATP-binding protein [Ensembl].... 0.05 OrthoFinder
KNA58584 VCV51_031123 peptide ABC transporter ATP-binding protein [Ensembl].... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0015833 peptide transport IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008811 chloramphenicol O-acetyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0033739 preQ1 synthase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
InterPro domains Description Start Stop
IPR013563 Oligopep_ABC_C 238 305
IPR003439 ABC_transporter-like_ATP-bd 24 187
No external refs found!