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  5. AGT24711

AGT24711 (N559_3048)


Aliases : N559_3048

Description : PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA [Ensembl].


Gene families : OG_02_0000104 (OrthoFinder) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24711
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AAK99033 spr0229, PTS-EIIA Phosphotransferase system sugar-specific EIIA component... 0.03 OrthoFinder
AAK99084 spr0280, PTS-EII Phosphotransferase system sugar-specific EII component... 0.07 OrthoFinder
AAK99227 spr0423, PTS-EII Phosphotransferase system sugar-specific EII component... 0.03 OrthoFinder
AAK99874 spr1071, lacF PTS system, lactose-specific IIA component [Ensembl].... 0.05 OrthoFinder
AAL00639 spr1836, ptcA Phosphotransferase system system, cellobiose-specific... 0.06 OrthoFinder
AEA93438 lacF, OG1RF_10751 PTS family lactose/cellobiose porter component IIA... 0.04 OrthoFinder
AGT22928 N559_1159 PEP-dependent phosphotransferase enzyme III [Ensembl]. 0.05 OrthoFinder
AKI49713 L2625_01854 PTS system, beta-glucoside-specific, IIA component... 0.03 OrthoFinder
AKI50703 L2625_02919 PTS system, cellobiose-specific, IIA component... 0.05 OrthoFinder
AKI50717 L2625_02933 PTS system, beta-glucoside-specific, IIA component... 0.04 OrthoFinder
CCG26154 No alias PTS system, lactose-specific IIA component [Ensembl].... 0.05 OrthoFinder
CCG26298 No alias PTS system, cellobiose-specific IIA component [Ensembl].... 0.07 OrthoFinder
CCG26677 No alias PTS system, cellobiose-specific IIA component [Ensembl].... 0.06 OrthoFinder
CCL19375 celC, BN171_3080022 PTS system, cellobiose-specific IIA component [Ensembl].... 0.03 OrthoFinder
CCL19895 BN171_3590016 PTS system, lactose/cellobiose-family IIA component... 0.06 OrthoFinder
CCL20119 licA, BN171_3690063 PTS system, lichenan-specific IIA component [Ensembl].... 0.03 OrthoFinder
CPD15515 lacF, ERS093114_02178 PTS system lactose-specific transporter subunit IIA... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0047465 N-acylglucosamine-6-phosphate 2-epimerase activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003188 PTS_IIA_lac/cel 19 112
No external refs found!