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AGT24851 (N559_3191)


Aliases : N559_3191

Description : DNA polymerase III subunit delta' [Ensembl].


Gene families : OG_02_0000680 (OrthoFinder) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24851
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AAC74183 holB, b1099 DNA polymerase III, delta prime subunit [Ensembl]. DNA... 0.1 OrthoFinder
AAK99640 spr0836, holB DNA polymerase III, delta' subunit [Ensembl]. DNA... 0.03 OrthoFinder
AAL20130 STM1201, holB DNA polymerase III, delta prime subunit [Ensembl]. DNA... 0.1 OrthoFinder
CPD36071 holB, ERS093114_02669 DNA polymerase III delta prime subunit [Ensembl]. DNA... 0.04 OrthoFinder
CRO47306 holB DNA polymerase III subunit delta' [Ensembl]. DNA... 0.04 OrthoFinder
EDJ91538 CGSHi22421_07202 DNA polymerase III subunit delta [Ensembl]. DNA... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
CC GO:0009360 DNA polymerase III complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
MF GO:0009020 tRNA (guanosine-2'-O-)-methyltransferase activity IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0062105 RNA 2'-O-methyltransferase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0106050 tRNA 2'-O-methyltransferase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR015199 DNA_pol_III_delta_C 209 320
No external refs found!